Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031010.1
Length=246390
Score E
Sequences producing significant alignments: (Bits) Value
SEQ35086 87.8 3e-12
SEQ36764 86.0 1e-11
>SEQ35086
Length=1045
Score = 87.8 bits (96), Expect = 3e-12
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 202543 AAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGAC 202602
||| | ||||| |||||||||||||| ||| | | |||| |||||||| || ||
Sbjct 217 AAGGACGACCGCACCGGCACCGGCACCCGCAGCCTCTTCGCCCGGCAGATGCGTTTCCAC 158
Query 202603 CTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCAC 202662
||| |||| || ||||| || | |||| |||||||| ||||| | || ||| |
Sbjct 157 CTGGCCGAGGGATTCCCGCTCATCGCCACCAAAAAGGTGCACCTGCACTCCATCGTCGGT 98
Query 202663 GAGCTGCTGTGGTTCCTGAAAGGGGACACCA 202693
|| ||||||||| ||||| | ||||||||
Sbjct 97 GAACTGCTGTGGATCCTGCGGGCGGACACCA 67
>SEQ36764
Length=622
Score = 86.0 bits (94), Expect = 1e-11
Identities = 131/185 (71%), Gaps = 4/185 (2%)
Strand=Plus/Minus
Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349
|| || || ||| | || ||||||||||| || | ||| | ||||||||||| ||||||
Sbjct 420 CTGTCCTGCCAGCTCTACCAGCGCAGCGCGGACATGTTCCTCGGCGTGCCGTTCAACATC 361
Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409
||||| || || | | ||| | ||| | || ||||||| | ||| || || |||
Sbjct 360 GCCTCCTACGCGCTGCGGACCCACATGTTCGCCCAGCAGGCGGGCCTGGAGGTCGGCGAG 301
Query 203410 TTCGTCTGGACAGGCGGTGA--TACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTC 203467
| ||| ||||| ||||| || |||||| || || ||| || || |||| || |
Sbjct 300 TGCGTGTGGACCGGCGGCGACTGCCACATC--TACGACATCCACCTCGACCAGGTGCGGC 243
Query 203468 TGCAG 203472
|||||
Sbjct 242 TGCAG 238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 787865681330000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |