Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value SEQ35086 87.8 3e-12 SEQ36764 86.0 1e-11 >SEQ35086 Length=1045 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 202543 AAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGAC 202602 ||| | ||||| |||||||||||||| ||| | | |||| |||||||| || || Sbjct 217 AAGGACGACCGCACCGGCACCGGCACCCGCAGCCTCTTCGCCCGGCAGATGCGTTTCCAC 158 Query 202603 CTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCAC 202662 ||| |||| || ||||| || | |||| |||||||| ||||| | || ||| | Sbjct 157 CTGGCCGAGGGATTCCCGCTCATCGCCACCAAAAAGGTGCACCTGCACTCCATCGTCGGT 98 Query 202663 GAGCTGCTGTGGTTCCTGAAAGGGGACACCA 202693 || ||||||||| ||||| | |||||||| Sbjct 97 GAACTGCTGTGGATCCTGCGGGCGGACACCA 67 >SEQ36764 Length=622 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/185 (71%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349 || || || ||| | || ||||||||||| || | ||| | ||||||||||| |||||| Sbjct 420 CTGTCCTGCCAGCTCTACCAGCGCAGCGCGGACATGTTCCTCGGCGTGCCGTTCAACATC 361 Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409 ||||| || || | | ||| | ||| | || ||||||| | ||| || || ||| Sbjct 360 GCCTCCTACGCGCTGCGGACCCACATGTTCGCCCAGCAGGCGGGCCTGGAGGTCGGCGAG 301 Query 203410 TTCGTCTGGACAGGCGGTGA--TACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTC 203467 | ||| ||||| ||||| || |||||| || || ||| || || |||| || | Sbjct 300 TGCGTGTGGACCGGCGGCGACTGCCACATC--TACGACATCCACCTCGACCAGGTGCGGC 243 Query 203468 TGCAG 203472 ||||| Sbjct 242 TGCAG 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787865681330000