Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031029.1
Length=93686
Score E
Sequences producing significant alignments: (Bits) Value
SEQ22413 165 5e-36
SEQ32968 147 1e-30
SEQ43844 145 5e-30
SEQ37149 93.3 3e-14
SEQ44338 91.5 9e-14
>SEQ22413
Length=7522
Score = 165 bits (182), Expect = 5e-36
Identities = 237/332 (71%), Gaps = 8/332 (2%)
Strand=Plus/Minus
Query 72629 ATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCTTCACCCCCTCGGGTGCG 72688
|||||| | |||| ||||| || || ||||| |||||| ||||||| |||||
Sbjct 3681 ATCACCATCGTCGGCAACCTCGTGGCGGACCCCGAGTTGCGCTACACCCCCAGCGGTGCC 3622
Query 72689 CCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAAGCAGTCCAACGAG 72748
||||| |||||||| || || ||| ||||| ||||||| ||| ||||| ||
Sbjct 3621 GCGGTCACCAACTTCCGGGTGGCTTCCACACCGCGACGCTTCGACTCACAGACCAACCAG 3562
Query 72749 TGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGCGCGAGCCGGCCGAGAAC 72808
||| |||| |||||| | |||||| |||||||||||||||| | |||||||||
Sbjct 3561 TGGGTCGACGACGAGGCCTTGTTCCTGACCTGCAACATCTGGCGCACCGCCGCCGAGAAC 3502
Query 72809 GTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTC-CAG---GGTCGCCTCAAGCA 72864
||| || | ||| ||||||| || || |||||| | | ||| || ||||
Sbjct 3501 GTCGCCAACAGCCTGCACAAGGGCGACCGGGTGATCGTCACCGGCCGGTTGCGTCAA--- 3445
Query 72865 GCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAGGTCGAGGA 72924
|| ||||||||| || || ||||| || || || ||||| | ||| ||| ||
Sbjct 3444 -CGGTCCTACGAGACCCGCGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGACCGACGA 3386
Query 72925 GATCGGCCCCGCGCTGCGGTACGCCACCGCCC 72956
| |||||||| ||||||| |||||||||||||
Sbjct 3385 GGTCGGCCCCTCGCTGCGCTACGCCACCGCCC 3354
>SEQ32968
Length=2597
Score = 147 bits (162), Expect = 1e-30
Identities = 237/338 (70%), Gaps = 6/338 (2%)
Strand=Plus/Minus
Query 72620 GACACCGTGATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCTTCACCCCC 72679
|| ||| |||||| || |||| ||||| || || || || | | ||| |||
Sbjct 2188 GATACCCAGATCACTGTCGTCGGCAACCTCGTTGCTGACGTTGACCTTAGGTACACGCCC 2129
Query 72680 TCGGGTGCGCCGGTCGCCAACTTCACCGTCGCA--AGCACCCCG-CGGTACTTCGACAAG 72736
|| ||| ||||||| |||||| |||||| | | ||||| |||| ||||| |
Sbjct 2128 AGTGGCGCGGCGGTCGCGAACTTCCGCGTCGCGTCAACGCCCCGTCGGT---TCGACTCG 2072
Query 72737 CAGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGCGCGAG 72796
|||| ||| ||||| |||| ||||| || ||||| |||||||| |||||||| ||
Sbjct 2071 AAGTCGAACCAGTGGGTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAG 2012
Query 72797 CCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGGGTCGC 72856
| |||||||||||| | | || ||| |||||| ||||| |||||| || ||
Sbjct 2011 GCCGCCGAGAACGTCGCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGG 1952
Query 72857 CTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAG 72916
|| ||||| |||||| || || || ||||| || || || ||||| | |||
Sbjct 1951 CTGCGCCAGCGGTCCTACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAG 1892
Query 72917 GTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGC 72954
||||| ||| ||||||| | || ||||||||||||||
Sbjct 1891 GTCGACGAGGTCGGCCCGTCTCTCCGGTACGCCACCGC 1854
>SEQ43844
Length=619
Score = 145 bits (160), Expect = 5e-30
Identities = 233/335 (70%), Gaps = 0/335 (0%)
Strand=Plus/Plus
Query 72620 GACACCGTGATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCTTCACCCCC 72679
|||||| |||||| | |||| ||||| ||||| ||||||||||||| ||||||
Sbjct 1 GACACCCCCATCACCATCGTCGGCAACCTCGTAGCCGACCCCGAACTGCGCTACACCCCG 60
Query 72680 TCGGGTGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAAGCAG 72739
|| || || | || |||| | |||||| |||||| || ||| ||||||||
Sbjct 61 TCCGGCGCCGCCGTGTGCAACGGCCGTGTCGCATCCACCCCCCGCACGTTCAACAAGCAG 120
Query 72740 TCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGCGCGAGCCG 72799
||||| ||||| |||| ||||| || || ||||| || |||| | |||||| || |
Sbjct 121 ACCAACCAGTGGGAGGATGCCGAAGCACTGTTCCTCACCTTCAACCTGTGGCGCCAGGCA 180
Query 72800 GCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGGGTCGCCTC 72859
|| |||||||| | | ||| |||||| || || |||||| || |||
Sbjct 181 GCGGAGAACGTGGCGAACAGCCTGCACAAGGGTGACCGGGTGATCGTCGTCGGCAATCTC 240
Query 72860 AAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAGGTC 72919
||||| ||||||| ||||| ||||| | || || || |||| ||||||
Sbjct 241 CGCCAGCGGTCCTACGAGTCGAAGACCGGCGACACGCGCACCGTGTACGAGATCGAGGCG 300
Query 72920 GAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGC 72954
|| ||| ||||||| | || ||||||||||||||
Sbjct 301 GACGAGGTCGGCCCTTCCCTCCGGTACGCCACCGC 335
>SEQ37149
Length=713
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 44105 GCCATCGAGGAGTTCGACGCGGACCCGGGCGTGGACGTCATCATCCTGGCCCGCGGCGGC 44164
||| |||| || | || ||||| || | || |||||||||||| | ||||||||||||
Sbjct 446 GCCCTCGATCAGCTGGAAGCGGATCCCCGGGTCGACGTCATCATCGTCGCCCGCGGCGGC 505
Query 44165 GGCTCGAAGGAAGACCTCCTCCCGTGGTCCGACGAGGCTCTGGTTCGCGCCGCGTTCG-- 44222
|||||| ||| |||||||| || | ||||| ||| | || || || | ||| ||
Sbjct 506 GGCTCGGTGGAGGACCTCCTGCCCTTTTCCGAGGAGACACTCGT--CCGGCACGTCCGCA 563
Query 44223 CGTCTGCAACCCCGGTTGTGTCTGCGATTGGCCACGAGAATGATCGGCCGCTCCTCGACC 44282
|| | || ||||| || ||| || || || || || ||| ||||||||
Sbjct 564 CGATGACGACTCCGGTCGTCAGTGCCATCGGACAAGAACCGGACACCCCGGTCCTCGACA 623
Query 44283 GCGTTGTGGACCTTCGAGCGGCAACTCCGACGGATGCAGCGAAACGTGTCGT 44334
|| | || || || || || || || ||||| || ||||| ||||||||
Sbjct 624 ATGTCGCCGATCTGCGGGCCGCGACGCCCACGGACGCCGCGAAGCGTGTCGT 675
>SEQ44338
Length=826
Score = 91.5 bits (100), Expect = 9e-14
Identities = 483/758 (64%), Gaps = 49/758 (6%)
Strand=Plus/Minus
Query 6643 TGCGCAATTGGGTTCGTCAGGCCGAGATCGACGGCGGGGTCCGCCCGGGCACCACGAGTG 6702
||||| |||| | || | |||| |||||| ||| | ||| || || |||| | |
Sbjct 803 TGCGCGGTTGGATCCGCCGCACCGAAATCGACACCGGTGACCGGCCCGGGGCCACCACCG 744
Query 6703 AGGACGCTGACCGCATCGCGGCGTTGGAGCGGGAGAACCGTGAACTGCGGCGAGCGAACA 6762
| ||| | ||||| ||| || |||| ||| |||| || ||||| || || |||
Sbjct 743 ACGACACCGACCGGATCCGCGCCCTGGAAAAAGAGCACCGGGAGCTGCGCCGGGCCAACG 684
Query 6763 CGATCTTGAAGCAGGCTTCGGCTTTCTTTGCGGCGGAGATCGACCGCCCACAGCGCTGAT 6822
|||| | || || |||||||| || ||||||||| |||||||||| ||||||||
Sbjct 683 AGATCCTCAAATCCGCATCGGCTTTTTTCGCGGCGGAGCTCGACCGCCCCTTGCGCTGAT 624
Query 6823 CGTGGAGTTCGTCGCGGCTCACCGCGATGAACACGGAGTCGATCCGATCTGTGCGGCATT 6882
| | | | ||| | ||| || || |||| ||||| |||||||| ||| |
Sbjct 623 CTGCAACTACATCGACTCGCACAAGGACGACTACGGGGTCGAGCCGATCTGCCGGGCGCT 564
Query 6883 GCGCGATACGTCCGCCCAGATCGCTCCGTCCACGGTACGAGCCCACCTGAGCCCCCAGAA 6942
|||| | | ||||||| ||||| || | || ||| | |||||
Sbjct 563 GCGCAGCGCCGGTGTGAAGATCGCCCCGTCGACCTTCTACGCACACACAA----CCAGAC 508
Query 6943 GACCGAGGCGCCTCGTGTGGTGCGTGACCGGGAGCTCCTTACCCAGG---TCCGCGCGGT 6999
||| | ||| || | |||| ||| ||| ||| ||| ||| || | | ||
Sbjct 507 CACC-ATCAGCC-CGCAGGCTGCGCGACGAGGAACTC---ACCGAGGAGATCACCACCGT 453
Query 7000 GCATGCCGACAACCTCGGCGTCTACGGTGCCCGCAAGGTGCATG-----CCCAATTG--- 7051
||| | ||| || || |||||| ||| | ||| || | | ||| |
Sbjct 452 GCACAAAGCGAACTACGACGCCTACGGCGCCAGGAAGATGTGGGTTGTCCTCAACCGGCA 393
Query 7052 ---CGCAGACAGG-GCCATAGTGCTGCCCGCTGCACCGTCGAGCGATTGATG---AAAGC 7104
| || || || | | || |||||||||||| ||||| || | ||| |||||
Sbjct 392 CGACCCACACCGGCGGGGTCATGTAGCCCGCTGCACCATCGAGAGACTCATGCGCAAAGC 333
Query 7105 CGATGGGCTGCAAGGGATAG--CGAGACTCAAGACACGCAAGACCACGCGCAGCGA---- 7158
|| | ||||| ||||| | || | | ||| || || || || ||| ||
Sbjct 332 CG---GCCTGCACGGGATCGTACGGG-CAAAAGCGCCG-AACACGACCCGCTCCGCCCCA 278
Query 7159 -GGGAGCTGAAACACCCCGGCCGGCTGACCGGGTCAACCGTCAGTTCACC-GCGGCGGCA 7216
||||| ||| ||||| | |||| ||||||||| || || || || | |
Sbjct 277 CGGGAG---AAATGCCCCGCC-----GACCTGGTCAACCGGCACTTTGCCAGCTACTGGC 226
Query 7217 CCGAACGCGTTGTGGGTGGCGGACCTGACCTACATCCGCACCCACTCGGGCTGGGTGTAC 7276
|| | || ||||||||| |||||| | || ||| | | || ||| ||||||||||||
Sbjct 225 CCAACCG-GTTGTGGGTCGCGGACATCACTTACGTGAGAACGTTCTCCGGCTGGGTGTAC 167
Query 7277 GCGGCGTTCGTCCTGGACGTGTTCTCGCGGATGGTCGTCGGCTGGCAGGTCTCGACCACC 7336
| || || ||| |||||||| || || | |||| |||||||| |||| ||
Sbjct 166 ACCGCCTTTGTCACCGACGTGTTTTCCCGCCGGATCGTTGGCTGGCAATGCTCGCGGTCC 107
Query 7337 ATGCACACCGACCTCGCCCTCGACGCCCTGAACATGGG 7374
|| |||||| || ||| || ||||||| ||||||
Sbjct 106 CTGTACACCGGACTGGCCAAAGATGCCCTGACCATGGG 69
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299502013797535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |