Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq61 493 2e-134 seq2872 279 7e-70 >seq61 Length=55249 Score = 493 bits (546), Expect = 2e-134 Identities = 1207/1815 (67%), Gaps = 26/1815 (1%) Strand=Plus/Minus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || || ||||| || ||||| ||||| || || || || || |||| | ||||| Sbjct 27978 GCTGGCTTTGTGCGCAGATAATACATTCCTGTCTTGAGGCCTGCCTTCCACGAGAAGAAA 27919 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 || ||| ||| | ||| || | || ||||| | ||||| || | || ||||| Sbjct 27918 TGAATGGATGTTAACTTGCCGTAGTTGGGTTCGGCAACGTGAATGTTGAATGATTGACTC 27859 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982 || || || ||||| || | |||||| ||||| || || | | ||| | |||||| Sbjct 27858 TGGTCAATAAAAGCACCGCGATCAGCTGCCATCTTGATGGTTGACTTCACCGAGATTTCC 27799 Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG--TTTG-TATTTTGAATGGAA 77039 || | |||||| ||| | | || | |||| | || | | ||||| ||||| Sbjct 27798 CAGACGGTTTTGTAAAGATCCCGTACTTCCTGAGGAATGGATTCGATGTTTTGTATGGAG 27739 Query 77040 CCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAA 77099 |||| | | || ||| |||||| || ||||||| ||| || | || |||||| Sbjct 27738 CCACGACTGGCAATGATTTGATTCTTCATGTCATCATCCCATAAATCTAGTTCGGTTAAA 27679 Query 77100 ACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 77159 | | | | |||| |||| || | | || ||||| ||||| || | | |||||| Sbjct 27678 TCCCGCAACAAATGATGATTTACCACATTGAACTCTCCGGACAAAACGCGCCTGGTGTAA 27619 Query 77160 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCA 77219 || || ||||| || || | || ||||| || |||| || || |||||||| || Sbjct 27618 ATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCCATGATCTGGGCAGTAGATGCC 27559 Query 77220 GTTGGCATAGGTGCCACCAATAAACTA-TTTCTGAGACCATGTGTTCTGATTTTATCTTT 77278 || ||||| || || || || | | | ||||| | ||||| | ||||||| ||| Sbjct 27558 GTGGGCATTGGAGCTAC-AAGCAGCGAGTTTCTAACGCCATGCTCTTTGATTTTCAATTT 27500 Query 77279 TAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAAT 77338 |||| ||||||||||||| || ||| ||||| | |||||| || ||||| Sbjct 27499 TAGAGCAGTCCAATCCCAAAGGCTTGTGGGTGTCTTGTCCCACATATCGTACTGCAGAAT 27440 Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398 ||| || || | | ||| || |||||||| || || || ||| ||| || || Sbjct 27439 TCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGGACCGTCCTTTTGAGCCAGCTC 27380 Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458 |||||| || || | || || || || || |||||||| |||| || |||||| | Sbjct 27379 ACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTGAGCAATAC 27320 Query 77459 TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAAC 77518 |||| ||| ||| | ||| || | | ||||| ||||| || || || |||||||| Sbjct 27319 GGCTTTGTCACTCTCATAGGGAAAACGCATCAGAATTAAGGCGTCGGCAAAGCCCTGAAC 27260 Query 77519 TCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATA 77578 ||||| ||||| || | |||||| |||||| | || || || || | ||||| || Sbjct 27259 GCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTTTGCCTCGGGCAGCGGATAGTA 27200 Query 77579 ATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTT 77638 ||| || || || ||||| || | |||||| || |||| || ||||| ||||| Sbjct 27199 ATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGTTTTAGTAACTTCCTTCAGTTT 27140 Query 77639 AAGAAAATCAAATCTTCCATCT---ATAACAAACATGTTCAAAGCTATAGATGCTAGATT 77695 ||||| ||| || ||| | |||||||| ||||| ||||| ||||| | ||| Sbjct 27139 CTTGAAATCGAATGTTTTCTCTGAAGTCACAAACATATTCAAGGCTATCGATGCCAAATT 27080 Query 77696 ACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACA 77755 || || || | ||||| | | ||||| | || || || || || || || || Sbjct 27079 GCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAATTTCAGTGCAGAGGTTGCTGCA 27020 Query 77756 TTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAAT 77815 |||||| ||||| | ||| || || |||||||| | ||||| |||||||| | || || Sbjct 27019 TTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTCCTTGAAGAGCAT 26960 Query 77816 AAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTT 77874 ||||||| || || |||| || ||||| | ||| | | ||| | || | | |||| Sbjct 26959 GTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCA-AAGAGTTTGTGCTT 26901 Query 77875 TTATCATA-GATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCA 77933 | |||| | |||||| || | ||| || || || | ||||| ||| ||||| ||| Sbjct 26900 TAATCACACGATTTG-CGCGACCCTCGCTCTCGTACTTTGTATACAGCTTCTCAAAGTCA 26842 Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993 || |||||||| || ||||| || || || | | || |||| || ||||| || || Sbjct 26841 TCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAGCGACCAATCCTCA 26782 Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053 | ||| || || |||||||| ||||| |||||||| | || || ||||| || Sbjct 26781 TTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACGA 26722 Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113 | ||| || ||||| || || || |||||||| || || | ||||| | ||||| ||| Sbjct 26721 GCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGGTCCAAGAACTCAAAGATATCGGAA 26662 Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173 ||||| ||||| || || || || | | | || ||||| || || || ||||| | | Sbjct 26661 TGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGCTTGCCGCCACCTTGATCGACA 26602 Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233 || | || |||||| | ||||| | ||| || | | ||| || || || ||||| Sbjct 26601 TAACGAGCCACATTATTAAACACTCTGAGCATGGGCACCAAACCATTTGAAGTGCCATTA 26542 Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT----CCCTATTCC 78289 || ||| | || | | || | || |||||| |||| | || ||| || || Sbjct 26541 GTGCCACAGATCGAGGTGCCCTTGGCACGAATA----CAATGCACATTGAGCCCAATGCC 26486 Query 78290 TCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTAT--- 78346 || || || || || | || || | | | | | | | || || || || Sbjct 26485 ACCAGCGGATTTGGAGATCATTGCACACTGCTCGACGGACTTGAAAATGCCTTCGATGGA 26426 Query 78347 ACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGC 78406 | | | |||| |||||| ||| ||||| ||||| || || || || | || Sbjct 26425 ATCGGAAACCAT--TGTTAA-AAGGAAACACGATGACATCTGGGGACGATTGGTGGCAGC 26369 Query 78407 ATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTC 78466 | |||||| || || |||||||||||||| | ||| || | |||||||| || || Sbjct 26368 AGCAAATAACGTTGGCGATGCATGCGTAAAATAGCGTTCCGATAACAGATTGTAAGTCTC 26309 Query 78467 AATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTG 78526 | ||| || || ||||| ||| ||||| | ||| || | ||||| ||| ||||| Sbjct 26308 GACAGCGGAATCGATGTCTTCGCCATGGATTCCAATCGCCACTCTCATCAGCATGTGCTG 26249 Query 78527 AGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAA 78586 || | ||| | | || ||| || || | ||| || || || | || || || Sbjct 26248 CGGACGTTCGGCGATTTTGCCATTGATCTTTAGCAAATACGAACGCTCGAGGGTCTTGAA 26189 Query 78587 ACCAAAATAGTTGTA 78601 |||||||||||||| Sbjct 26188 GCCAAAATAGTTGTA 26174 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 78746 AAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGC 78805 ||| | ||| || ||||||||||| ||||| || || || ||||| || || | ||| Sbjct 25853 AAACACTTTCTTAGTTTCCTTGTGCAGATTGGAAACCGCAATTCTGGCTGCCAATTGAGC 25794 Query 78806 ATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTC 78865 ||| || | ||| || || || | ||||||| || || || |||||| |||| | || Sbjct 25793 ATAGTCGGCATGATGCGTTGTTAAGCTGGCTGCGATCTCAGCAGCTAAATTATCCAGTTC 25734 Query 78866 TATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGAT 78913 | ||||| || ||| ||| || || | |||||||||| || ||| Sbjct 25733 TTGGGTTGTCACACCACAATAAAGGCCATTTATAACTTTCAAGGTGAT 25686 >seq2872 Length=9359 Score = 279 bits (308), Expect = 7e-70 Identities = 571/840 (68%), Gaps = 13/840 (2%) Strand=Plus/Plus Query 47839 TAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCA 47898 |||||||||| |||||||||||||| |||||||| || || |||||||| |||| Sbjct 2976 TAACTCCCATGCGCTGATATTCACCCACTTTCTTCTCGAAGAAGTTGGTTTTGCCATCCA 3035 Query 47899 ATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTA 47958 | || || | ||||| || |||||||| || || ||||| || | ||| | Sbjct 3036 AAGAGATCATCTCCATGAACGAGAATGGATTCTTTGTGTTGTAAATCTTGCCCACTCCAA 3095 Query 47959 ATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCA 48018 || | || | ||| || || || || |||||| ||||| |||| |||| Sbjct 3096 GCTCAACCAATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGTTCA 3155 Query 48019 TTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCAT 48078 | || || | || || || || || || || || ||||| || || ||||| ||||||| Sbjct 3156 TGCCAATCAAGTTGACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAGCAT 3215 Query 48079 CCACTATTAT--CGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACAT 48136 || ||| || | ||| | | |||| ||| || | | || |||||||| ||||| Sbjct 3216 CCGTTATGATTTCAATGATGCG--TTCCCGACTAGGCCGCTGCACCAAATGTTGGAACAT 3273 Query 48137 TAAACAT-GCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATG 48195 || || ||||| |||||||| ||||||||||| | | || |||||||| || |||| Sbjct 3274 -AAGCACCGCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATG 3332 Query 48196 TGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT-CCAGAA 48254 | || || ||||| |||||||| || || ||||| || || | || |||| | ||| Sbjct 3333 TAAGTCCAGGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGC-AAAGCTCCCACTG 3391 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG----CTTC 48310 ||||| |||||||| || || ||||| || ||| | || || | ||| |||| Sbjct 3392 AAGAAGATGCCTTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTC 3451 Query 48311 GTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTAT 48370 | | | ||||| | ||||| || |||||| ||| ||| ||||| ||||| || Sbjct 3452 GAAGAG-ATCCAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAAT 3510 Query 48371 AGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACT 48430 ||||| |||||| ||| | | || ||| | | || || || || | | ||| Sbjct 3511 GGCATTGAAGAGATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACT 3570 Query 48431 ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTC 48490 ||||||||||| || | ||| || || || ||||| || || ||||| || | || || Sbjct 3571 GTACATTTCGGAATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTC 3630 Query 48491 TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 || | ||| || || | ||| ||||| ||| ||| || || || ||||||||| Sbjct 3631 GGTCACCTGCACTTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGA 3690 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT 48610 ||||||||| || || || ||||| || |||| || || || || || Sbjct 3691 AGCAGCAAAGAAGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGC 3750 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 ||| ||| | || || || || | ||| |||||||| | ||||| || ||||| || || Sbjct 3751 CCAATCAGTCATGTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAACGATGCTTCAGC 3810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694268453687200