Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq61 502 4e-137 seq2872 297 3e-75 >seq61 Length=55249 Score = 502 bits (556), Expect = 4e-137 Identities = 1219/1832 (67%), Gaps = 18/1832 (1%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||| ||||| | | || ||||| ||||| || ||||| ||||| || || || || Sbjct 27999 GTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCTGTCTTGAGG 27940 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || |||| | ||||||| ||| ||||| ||| || | || ||||| | Sbjct 27939 CCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGTTCGGCAACG 27880 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| || | || ||||| || || || ||||| || | |||||| ||||| || || Sbjct 27879 TGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCCATCTTGATG 27820 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA-- 75614 | | ||| | |||||||| | |||||| ||| | | || | |||| Sbjct 27819 GTTGACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCCTGAGGAATG 27760 Query 75615 GATTTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 |||| | | ||||| ||||| || | | | || ||| |||||| || ||||||| | Sbjct 27759 GATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATGTCATCATCC 27700 Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733 || || | | ||||||||| | | | | |||| |||| || | | || ||||| Sbjct 27699 CATAAATCTAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTGAACTCTCCG 27640 Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793 ||||| || | | |||||||| || ||||| || || | || ||||| || ||| Sbjct 27639 GACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCC 27580 Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTGAGACC 75852 | || || ||||| || || || ||||| || || || || | | | ||||| | || Sbjct 27579 ATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCTAC-AAGCAGCGAGTTTCTAACGCC 27521 Query 75853 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912 ||| | ||||||| ||||||| ||||||||||||| || ||| || Sbjct 27520 ATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAATCCCAAAGGCTTGTGGGTGTCTTGTC 27461 Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972 ||| | |||||| || |||||||| ||||| | | ||| || ||||| || | Sbjct 27460 CCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGG 27401 Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAA 76032 |||||||||| ||| || || ||||| ||||| | ||||| || || || |||||||| Sbjct 27400 ACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAA 27341 Query 76033 AATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAA 76092 |||| || ||| || | |||| ||| ||| | ||| || | | ||||| || Sbjct 27340 GATCTGCTGATTGAGCAATACGGCTTTGTCACTCTCATAGGGAAAACGCATCAGAATTAA 27281 Query 76093 TGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTC 76152 || || || | |||||||| ||||| ||||| || | |||||| |||||| | | Sbjct 27280 GGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTT 27221 Query 76153 AGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTAC 76212 || || || | || || ||||| ||||| || ||||| || | ||||||| || Sbjct 27220 TGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGT 27161 Query 76213 TTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTA---TCACAAACATATT 76269 |||| || ||||| ||||| ||||| ||| || ||| ||||||||||||| Sbjct 27160 TTTAGTAACTTCCTTCAGTTTCTTGAAATCGAATGTTTTCTCTGAAGTCACAAACATATT 27101 Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTAT 76329 | ||||| ||||| | ||| || ||||| | ||||| | | ||||| | || Sbjct 27100 CAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAAT 27041 Query 76330 CTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTT 76389 || ||||| || || || || ||||| || |||| ||| || || |||||||| |||| Sbjct 27040 TTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTT 26981 Query 76390 ACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGA 76449 || |||||||| | || | ||||||| ||||| |||| || ||||| | ||| | Sbjct 26980 GCAAGAGTCCTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGC 26921 Query 76450 TTTCCAGACGACTCT-AGCTTTTATTATA-GATTTGTATCGCTTCTCTCTTTCATATTGT 76507 | ||| | || | | ||||| || | | |||||| || ||| || || || | | Sbjct 26920 ATACCA-AAGAGTTTGTGCTTTAATCACACGATTTG-CGCGACCCTCGCTCTCGTACTTT 26863 Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567 ||||| | | ||||| ||||| |||||||| || ||||| || ||||| | | ||| Sbjct 26862 GTATACAGCTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGA 26803 Query 76568 CACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCAT 76627 |||| || ||||| || ||| ||| || || |||||||| ||||| |||||||| Sbjct 26802 CACAACAGCGACCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCAC 26743 Query 76628 AGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCT 76687 | || || ||||| || | ||| | ||||| || || || |||||||| || || Sbjct 26742 AAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGGTCC 26683 Query 76688 AGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGT 76747 | |||||| | ||||| |||||||| ||||| || || || || | | | || ||||| Sbjct 26682 AAGAACTCAAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGC 26623 Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807 || || || ||||| | ||| | || |||||| | ||||| | ||| || | Sbjct 26622 TTGCCGCCACCTTGATCGACATAACGAGCCACATTATTAAACACTCTGAGCATGGGCACC 26563 Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTA 76867 | || || || || ||||| || ||| | || | | || ||||||||| | Sbjct 26562 AAACCATTTGAAGTGCCATTAGTGCCACAGATCGAGGTGCCCTTGGCACGAATACAATGC 26503 Query 76868 ATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCA 76927 | | || || || || || || ||| ||||| | ||||| | | | | | Sbjct 26502 ACATTGAGCCCAATGCCACCAGCGGATTTGGAGATCATTGCACACTGCTCGACGGACTTG 26443 Query 76928 TAGATGCCCTCTATACTATC---ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA 76984 | ||||| || || ||| | |||| |||||| ||| ||||| ||||| || Sbjct 26442 AAAATGCCTTCGATGGAATCGGAAACCAT--TGTTAA-AAGGAAACACGATGACATCTGG 26386 Query 76985 TGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAA 77044 || || || | ||| ||| || || || |||||||| || || | ||| || Sbjct 26385 GGACGATTGGTGGCAGCAGCAAATAACGTTGGCGATGCATGCGTAAAATAGCGTTCCGAT 26326 Query 77045 AGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACA 77104 | |||||||| || || | | | | || || || ||| ||||| | || || Sbjct 26325 AACAGATTGTAAGTCTCGACAGCGGAATCGATGTCTTCGCCATGGATTCCAATCGCCACT 26266 Query 77105 CGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGAT 77164 | ||||| ||| ||||| || ||||| | | || ||| || || | ||| || || Sbjct 26265 CTCATCAGCATGTGCTGCGGACGTTCGGCGATTTTGCCATTGATCTTTAGCAAATACGAA 26206 Query 77165 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 || | || || || |||||||||||||| Sbjct 26205 CGCTCGAGGGTCTTGAAGCCAAAATAGTTGTA 26174 Score = 87.8 bits (96), Expect = 3e-12 Identities = 120/166 (72%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 77341 AAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT-- 77398 ||| | ||| || ||||||||||| ||||| || || || ||||| || || |||| Sbjct 25853 AAACACTTTCTTAGTTTCCTTGTGCAGATTGGAAACCGCAATTCTGGCTGC--CAATTGA 25796 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 |||||||| | ||| || || || || ||||||| || || || |||||| |||| | | Sbjct 25795 GCATAGTCGGCATGATGCGTTGTTAAGCTGGCTGCGATCTCAGCAGCTAAATTATCCAGT 25736 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 ||| || || || || ||| || || | |||||||||| || Sbjct 25735 TCTTGGGTTGTCACACCACAATAAAGGCCATTTATAACTTTCAAGG 25690 >seq2872 Length=9359 Score = 297 bits (328), Expect = 3e-75 Identities = 575/839 (69%), Gaps = 11/839 (1%) Strand=Plus/Plus Query 46328 TAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCA 46387 |||||||||| || |||||||| || |||||||| || || |||||||| |||| Sbjct 2976 TAACTCCCATGCGCTGATATTCACCCACTTTCTTCTCGAAGAAGTTGGTTTTGCCATCCA 3035 Query 46388 ATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTA 46447 | || || | ||||| || || ||||| | || ||||| || | ||| | Sbjct 3036 AAGAGATCATCTCCATGAACGAGAATGGATTCTTTGTGTTGTAAATCTTGCCCACTCCAA 3095 Query 46448 ATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCA 46507 || | || | ||| || || || || ||||| ||||| |||| |||| Sbjct 3096 GCTCAACCAATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGTTCA 3155 Query 46508 TTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCAT 46567 | || || | ||||| || || || || || || ||||| || |||||||| ||||||| Sbjct 3156 TGCCAATCAAGTTGACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAGCAT 3215 Query 46568 CCGATATTAT--CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACAT 46625 ||| ||| || | ||| | | |||| ||| || | |||| |||||||| ||||| Sbjct 3216 CCGTTATGATTTCAATGATGCG--TTCCCGACTAGGCCGCTGCACCAAATGTTGGAACAT 3273 Query 46626 TAAACAT-GCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATG 46684 || || ||||| |||||||| || |||||||| | | || |||||||| || |||| Sbjct 3274 -AAGCACCGCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATG 3332 Query 46685 TGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT-CCAGAA 46743 | || |||||||| ||||||||||| || ||||| || || | || |||| | ||| Sbjct 3333 TAAGTCCAGGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGC-AAAGCTCCCACTG 3391 Query 46744 AAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT- 46802 ||||| |||||||| ||||| || || || | || | || || | ||||| | || Sbjct 3392 AAGAAGATGCCTTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTC 3451 Query 46803 -ATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATA 46860 | || ||||| ||||||| || ||||| ||| ||| ||||| ||||| || Sbjct 3452 GAAGAGATCCAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAATG 3511 Query 46861 GCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTA 46920 ||||| |||||| ||| | | || | ||| | | ||| || || || | | ||| Sbjct 3512 GCATTGAAGAGATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTG 3571 Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 46980 |||||||| ||||| | || || || || ||||| || || ||||| || | ||| || Sbjct 3572 TACATTTCGGAATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCG 3631 Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTA 47040 || | ||| || ||| | ||| ||||| || ||| || || || ||||||||| | Sbjct 3632 GTCACCTGCACTTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAA 3691 Query 47041 GCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTC 47100 |||||||| || ||||| ||||| || |||| |||| || || || | Sbjct 3692 GCAGCAAAGAAGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCC 3751 Query 47101 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 || ||| | || || || || | ||| |||||||| | |||||||| || || || || Sbjct 3752 CAATCAGTCATGTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAACGATGCTTCAGC 3810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712523526993600