Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq61 502 4e-137
seq2872 297 3e-75
>seq61
Length=55249
Score = 502 bits (556), Expect = 4e-137
Identities = 1219/1832 (67%), Gaps = 18/1832 (1%)
Strand=Plus/Minus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
||||| ||||| | | || ||||| ||||| || ||||| ||||| || || || ||
Sbjct 27999 GTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCTGTCTTGAGG 27940
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
|| |||| | ||||||| ||| ||||| ||| || | || ||||| |
Sbjct 27939 CCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGTTCGGCAACG 27880
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
||||| || | || ||||| || || || ||||| || | |||||| ||||| || ||
Sbjct 27879 TGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCCATCTTGATG 27820
Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA-- 75614
| | ||| | |||||||| | |||||| ||| | | || | ||||
Sbjct 27819 GTTGACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCCTGAGGAATG 27760
Query 75615 GATTTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673
|||| | | ||||| ||||| || | | | || ||| |||||| || ||||||| |
Sbjct 27759 GATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATGTCATCATCC 27700
Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733
|| || | | ||||||||| | | | | |||| |||| || | | || |||||
Sbjct 27699 CATAAATCTAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTGAACTCTCCG 27640
Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793
||||| || | | |||||||| || ||||| || || | || ||||| || |||
Sbjct 27639 GACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCC 27580
Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTGAGACC 75852
| || || ||||| || || || ||||| || || || || | | | ||||| | ||
Sbjct 27579 ATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCTAC-AAGCAGCGAGTTTCTAACGCC 27521
Query 75853 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912
||| | ||||||| ||||||| ||||||||||||| || ||| ||
Sbjct 27520 ATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAATCCCAAAGGCTTGTGGGTGTCTTGTC 27461
Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972
||| | |||||| || |||||||| ||||| | | ||| || ||||| || |
Sbjct 27460 CCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGG 27401
Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAA 76032
|||||||||| ||| || || ||||| ||||| | ||||| || || || ||||||||
Sbjct 27400 ACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAA 27341
Query 76033 AATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAA 76092
|||| || ||| || | |||| ||| ||| | ||| || | | ||||| ||
Sbjct 27340 GATCTGCTGATTGAGCAATACGGCTTTGTCACTCTCATAGGGAAAACGCATCAGAATTAA 27281
Query 76093 TGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTC 76152
|| || || | |||||||| ||||| ||||| || | |||||| |||||| | |
Sbjct 27280 GGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTT 27221
Query 76153 AGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTAC 76212
|| || || | || || ||||| ||||| || ||||| || | ||||||| ||
Sbjct 27220 TGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGT 27161
Query 76213 TTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTA---TCACAAACATATT 76269
|||| || ||||| ||||| ||||| ||| || ||| |||||||||||||
Sbjct 27160 TTTAGTAACTTCCTTCAGTTTCTTGAAATCGAATGTTTTCTCTGAAGTCACAAACATATT 27101
Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTAT 76329
| ||||| ||||| | ||| || ||||| | ||||| | | ||||| | ||
Sbjct 27100 CAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAAT 27041
Query 76330 CTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTT 76389
|| ||||| || || || || ||||| || |||| ||| || || |||||||| ||||
Sbjct 27040 TTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTT 26981
Query 76390 ACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGA 76449
|| |||||||| | || | ||||||| ||||| |||| || ||||| | ||| |
Sbjct 26980 GCAAGAGTCCTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGC 26921
Query 76450 TTTCCAGACGACTCT-AGCTTTTATTATA-GATTTGTATCGCTTCTCTCTTTCATATTGT 76507
| ||| | || | | ||||| || | | |||||| || ||| || || || | |
Sbjct 26920 ATACCA-AAGAGTTTGTGCTTTAATCACACGATTTG-CGCGACCCTCGCTCTCGTACTTT 26863
Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567
||||| | | ||||| ||||| |||||||| || ||||| || ||||| | | |||
Sbjct 26862 GTATACAGCTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGA 26803
Query 76568 CACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCAT 76627
|||| || ||||| || ||| ||| || || |||||||| ||||| ||||||||
Sbjct 26802 CACAACAGCGACCAATCCTCATTGGCCTCCACACGCTTCATAAACAGATCGGGTATCCAC 26743
Query 76628 AGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCT 76687
| || || ||||| || | ||| | ||||| || || || |||||||| || ||
Sbjct 26742 AAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGGTCC 26683
Query 76688 AGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGT 76747
| |||||| | ||||| |||||||| ||||| || || || || | | | || |||||
Sbjct 26682 AAGAACTCAAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGC 26623
Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807
|| || || ||||| | ||| | || |||||| | ||||| | ||| || |
Sbjct 26622 TTGCCGCCACCTTGATCGACATAACGAGCCACATTATTAAACACTCTGAGCATGGGCACC 26563
Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTA 76867
| || || || || ||||| || ||| | || | | || ||||||||| |
Sbjct 26562 AAACCATTTGAAGTGCCATTAGTGCCACAGATCGAGGTGCCCTTGGCACGAATACAATGC 26503
Query 76868 ATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCA 76927
| | || || || || || || ||| ||||| | ||||| | | | | |
Sbjct 26502 ACATTGAGCCCAATGCCACCAGCGGATTTGGAGATCATTGCACACTGCTCGACGGACTTG 26443
Query 76928 TAGATGCCCTCTATACTATC---ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA 76984
| ||||| || || ||| | |||| |||||| ||| ||||| ||||| ||
Sbjct 26442 AAAATGCCTTCGATGGAATCGGAAACCAT--TGTTAA-AAGGAAACACGATGACATCTGG 26386
Query 76985 TGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAA 77044
|| || || | ||| ||| || || || |||||||| || || | ||| ||
Sbjct 26385 GGACGATTGGTGGCAGCAGCAAATAACGTTGGCGATGCATGCGTAAAATAGCGTTCCGAT 26326
Query 77045 AGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACA 77104
| |||||||| || || | | | | || || || ||| ||||| | || ||
Sbjct 26325 AACAGATTGTAAGTCTCGACAGCGGAATCGATGTCTTCGCCATGGATTCCAATCGCCACT 26266
Query 77105 CGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGAT 77164
| ||||| ||| ||||| || ||||| | | || ||| || || | ||| || ||
Sbjct 26265 CTCATCAGCATGTGCTGCGGACGTTCGGCGATTTTGCCATTGATCTTTAGCAAATACGAA 26206
Query 77165 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196
|| | || || || ||||||||||||||
Sbjct 26205 CGCTCGAGGGTCTTGAAGCCAAAATAGTTGTA 26174
Score = 87.8 bits (96), Expect = 3e-12
Identities = 120/166 (72%), Gaps = 4/166 (2%)
Strand=Plus/Minus
Query 77341 AAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT-- 77398
||| | ||| || ||||||||||| ||||| || || || ||||| || || ||||
Sbjct 25853 AAACACTTTCTTAGTTTCCTTGTGCAGATTGGAAACCGCAATTCTGGCTGC--CAATTGA 25796
Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458
|||||||| | ||| || || || || ||||||| || || || |||||| |||| | |
Sbjct 25795 GCATAGTCGGCATGATGCGTTGTTAAGCTGGCTGCGATCTCAGCAGCTAAATTATCCAGT 25736
Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504
||| || || || || ||| || || | |||||||||| ||
Sbjct 25735 TCTTGGGTTGTCACACCACAATAAAGGCCATTTATAACTTTCAAGG 25690
>seq2872
Length=9359
Score = 297 bits (328), Expect = 3e-75
Identities = 575/839 (69%), Gaps = 11/839 (1%)
Strand=Plus/Plus
Query 46328 TAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCA 46387
|||||||||| || |||||||| || |||||||| || || |||||||| ||||
Sbjct 2976 TAACTCCCATGCGCTGATATTCACCCACTTTCTTCTCGAAGAAGTTGGTTTTGCCATCCA 3035
Query 46388 ATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTA 46447
| || || | ||||| || || ||||| | || ||||| || | ||| |
Sbjct 3036 AAGAGATCATCTCCATGAACGAGAATGGATTCTTTGTGTTGTAAATCTTGCCCACTCCAA 3095
Query 46448 ATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCA 46507
|| | || | ||| || || || || ||||| ||||| |||| ||||
Sbjct 3096 GCTCAACCAATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGTTCA 3155
Query 46508 TTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCAT 46567
| || || | ||||| || || || || || || ||||| || |||||||| |||||||
Sbjct 3156 TGCCAATCAAGTTGACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAGCAT 3215
Query 46568 CCGATATTAT--CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACAT 46625
||| ||| || | ||| | | |||| ||| || | |||| |||||||| |||||
Sbjct 3216 CCGTTATGATTTCAATGATGCG--TTCCCGACTAGGCCGCTGCACCAAATGTTGGAACAT 3273
Query 46626 TAAACAT-GCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATG 46684
|| || ||||| |||||||| || |||||||| | | || |||||||| || ||||
Sbjct 3274 -AAGCACCGCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATG 3332
Query 46685 TGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT-CCAGAA 46743
| || |||||||| ||||||||||| || ||||| || || | || |||| | |||
Sbjct 3333 TAAGTCCAGGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGC-AAAGCTCCCACTG 3391
Query 46744 AAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT- 46802
||||| |||||||| ||||| || || || | || | || || | ||||| | ||
Sbjct 3392 AAGAAGATGCCTTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTC 3451
Query 46803 -ATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATA 46860
| || ||||| ||||||| || ||||| ||| ||| ||||| ||||| ||
Sbjct 3452 GAAGAGATCCAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAATG 3511
Query 46861 GCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTA 46920
||||| |||||| ||| | | || | ||| | | ||| || || || | | |||
Sbjct 3512 GCATTGAAGAGATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTG 3571
Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 46980
|||||||| ||||| | || || || || ||||| || || ||||| || | ||| ||
Sbjct 3572 TACATTTCGGAATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCG 3631
Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTA 47040
|| | ||| || ||| | ||| ||||| || ||| || || || ||||||||| |
Sbjct 3632 GTCACCTGCACTTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAA 3691
Query 47041 GCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTC 47100
|||||||| || ||||| ||||| || |||| |||| || || || |
Sbjct 3692 GCAGCAAAGAAGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCC 3751
Query 47101 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159
|| ||| | || || || || | ||| |||||||| | |||||||| || || || ||
Sbjct 3752 CAATCAGTCATGTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAACGATGCTTCAGC 3810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712523526993600
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