Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value SEQ45334 165 1e-35 SEQ36764 105 1e-17 >SEQ45334 Length=507 Score = 165 bits (182), Expect = 1e-35 Identities = 231/315 (73%), Gaps = 12/315 (4%) Strand=Plus/Plus Query 88276 GCAGATGAAGACCTTGGCTTCTTGCCCGGCGACGTCTCAGAGAAGTTCGCCCCTTACTTC 88335 || ||||||||||| || |||||||| || || |||| ||||||||||||||||| ||| Sbjct 99 GCGGATGAAGACCTCGGTTTCTTGCCGGGGGATATCTCCGAGAAGTTCGCCCCTTATTTC 158 Query 88336 CGTCCTGTCTACGACGTGCTAAGCAAACGCTTAGGTGGTCAATTC--TTACGC--TACTG 88391 || || || || ||| | || || ||||| || ||| ||| || ||||| Sbjct 159 CGCCCGGTGTATGACATTCTGGTACGTCGTTTAGGA--TC--TTCCTTTATGCAGTACTG 214 Query 88392 TTTAAAGCCGGGAATTGACAAGGTAGAGATTGCTCCCTTCGCCTACATGCGCGGACGTAG 88451 | |||| ||| | ||||||||||||||| || ||||| || ||||||||||| | Sbjct 215 CCTGCGCCCGGAAATCGGCAAGGTAGAGATTGCGCCGTTCGCTTATATGCGCGGACGCAC 274 Query 88452 CTTTGAAAATGCAGTCATTTTATTAGATGAAGCTCAGAACACTACTGCTCAG-CAGATGA 88510 ||| |||||||| ||| || | | |||||||| |||||| || || ||| ||||||| Sbjct 275 CTTCGAAAATGCGGTCGTTATCCTGGATGAAGCCCAGAACGTGACCGC-CAGCCAGATGA 333 Query 88511 AGCTCTTCCTGACACGTATCGGGGAGAAC-TGTCTCGTGATTGTCAATGGCGATATTACT 88569 | | |||||||| || | ||||| ||| || | || || || || ||||| | || Sbjct 334 AAATGTTCCTGACCCGCCTGGGGGAAAACGTGAC-GGTTATCGTTAACGGCGACGTGACC 392 Query 88570 CAGTGCGACTTACCG 88584 ||||||||| | ||| Sbjct 393 CAGTGCGACCTGCCG 407 >SEQ36764 Length=622 Score = 105 bits (116), Expect = 1e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 100167 CTGTCCTGTCAACTCTACCAACGTAGCGCGGACGTGTTCTTAGGTGTGCCGTTCAATATC 100226 |||||||| || |||||||| || ||||||||| ||||| | || ||||||||||| ||| Sbjct 420 CTGTCCTGCCAGCTCTACCAGCGCAGCGCGGACATGTTCCTCGGCGTGCCGTTCAACATC 361 Query 100227 GCGTCGTACGCTCTGCTGGTTCACATGTTTGCACAACAAGCCAACATGGCCGTGGGCGAC 100286 || || ||||| |||| | |||||||| || || || || | ||| || ||||| Sbjct 360 GCCTCCTACGCGCTGCGGACCCACATGTTCGCCCAGCAGGCGGGCCTGGAGGTCGGCGAG 301 Query 100287 TTCGTCTGGACGGGTGGTGAC 100307 | ||| ||||| || || ||| Sbjct 300 TGCGTGTGGACCGGCGGCGAC 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 733852028023800