Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031072.1
Length=47898
Score E
Sequences producing significant alignments: (Bits) Value
SEQ29447 197 4e-46
SEQ26880 113 1e-20
SEQ27525 102 2e-17
SEQ44291 80.6 8e-11
>SEQ29447
Length=7397
Score = 197 bits (218), Expect = 4e-46
Identities = 255/349 (73%), Gaps = 5/349 (1%)
Strand=Plus/Minus
Query 15140 GCGACGGCGCTCGTCGAGGTGGGCGACCCGATGAAGATGTACGCCAACACCGCCGTCCCG 15199
|||||||| || || ||| ||| |||||||||||||||||||||| || || || |||
Sbjct 5641 GCGACGGCACTGGTGGAGTCGGGTGACCCGATGAAGATGTACGCCAGCAATGCGGTTCCG 5582
Query 15200 GAATCGCTGAAGTTCCCGCACGACGCCGTCGGCTCCGACCACGACTCGATCGGCCTGTTC 15259
|| |||||||| | |||||||||||| |||| |||||| || || ||||| ||||||
Sbjct 5581 GAGTCGCTGAACTACCCGCACGACGCGATCGGGAGCGACCATGATTCCATCGGTCTGTTC 5522
Query 15260 CAGCAGCGGCAGGCAGGGTGGGGGACCGTCGCCGACCGGATGGATCCGCACCGCTCGGCG 15319
|||||||| ||||| |||||||| |||||||| | || |||||||||||| | |||
Sbjct 5521 CAGCAGCGTCAGGCCGGGTGGGGCACCGTCGCACAGCGTATGGATCCGCACGACAGTGCG 5462
Query 15320 AAGATGTTCTACGACGC---GCTGATGAAGGTCCCCGGCTGGGAAACCATGGACATGGGT 15376
|||||| | || ||| |||| |||| |||| |||| | | |||||| ||
Sbjct 5461 TCGATGTTTTTCGCCGCGATGCTGCGGAAGTTCCCGAACTGGCAGTCGATGGACCCCGGC 5402
Query 15377 GCCGCGGCACAGGCGGTGCAGCGCAGCGCATTCCCCGGGAAGTACGCCGGCCGGATGGCG 15436
|||| ||| |||| |||||| | ||||| || | |||| | | |||||
Sbjct 5401 GCCGTGGCGCAGGGTGTGCAGGTCTCGGCATTTCCGGACCGGTACAACACCAAGATGGGT 5342
Query 15437 CGTGCGACGGAGCTCGTCGACAAGTTC-GGCATCTACGACCAGGGCGGC 15484
| || |||||||| | || | | ||| | |||||||||||||||
Sbjct 5341 AGGGCTGAAGAGCTCGTTG-CATCTGCGGGCCTGTACGACCAGGGCGGC 5294
>SEQ26880
Length=5820
Score = 113 bits (124), Expect = 1e-20
Identities = 128/170 (75%), Gaps = 5/170 (3%)
Strand=Plus/Minus
Query 15170 ATGAAGATGTACGCCAACACCGCCGTCCCGGAATCGCTGAAGTTCCCGCACGACGCCGTC 15229
|||||||||||||||||| | || || || || || |||| ||||| ||||| || |||
Sbjct 1517 ATGAAGATGTACGCCAACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTC 1458
Query 15230 GGCTCCGACCACGACTCGATCGGCCTGTTCCAGCAGCGGCA----GGCAGGGTGGGGGAC 15285
||| |||| |||||| ||||||| ||||||||||| | ||| | |||||| ||
Sbjct 1457 GGCGGCGACGCGGACTCGGTCGGCCTTTTCCAGCAGCGCGACAATGGC-GCGTGGGGCAC 1399
Query 15286 CGTCGCCGACCGGATGGATCCGCACCGCTCGGCGAAGATGTTCTACGACG 15335
| ||| ||||| ||||| || | || || || |||||||||||||
Sbjct 1398 CATCGAAGACCGCATGGACCCTGAGCGGTCCGCCGGAATGTTCTACGACG 1349
>SEQ27525
Length=13899
Score = 102 bits (112), Expect = 2e-17
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 2840 GCGATCGCCTACCACGACAACATGATCGCGATCGCCGGTCTCGCCCACTTCCTCAACCTC 2899
|||||||||||||||||| ||||| |||| || | || || |||||||| |||||
Sbjct 9806 GCGATCGCCTACCACGACTCGATGATGGCGAAGGCGGTGCTGGCGCACTTCCTGAACCTT 9747
Query 2900 GAAGGCAAGGGCGGCTCGTACGCGCTGGCCAGCGTCCAGGAGCACACGTTCTCCCAGTCG 2959
|| |||||||||||||| ||||| ||||| |||| | | |||| |||||||
Sbjct 9746 GAGGGCAAGGGCGGCTCCTACGCCCTGGCGGAGACCCAGTCGGATCTGTTCATCCAGTCG 9687
Query 2960 GTGCAGACCGTCGGCGAGCAGACCCGCGACATCGGCAACGCGCACGTGATCGAGGACCTC 3019
|||||||| ||| || || |||| || || | |||| | | || ||||||
Sbjct 9686 CTGCAGACCATCGCGGACTGGATAGCGGACACCGCCACCCAGCACATCGTGGAAGACCTC 9627
Query 3020 GTCGACATC 3028
|| ||||||
Sbjct 9626 GTTGACATC 9618
>SEQ44291
Length=775
Score = 80.6 bits (88), Expect = 8e-11
Identities = 115/162 (71%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 37426 GACGACTTCGACTACGGCCACGCCTGCGAGCTCGCCGCCCGCGAGTACTGGCTGTACAAG 37485
||| || |||||| ||||||| | |||| ||| || | |||| | ||||
Sbjct 737 GACCACCTCGACTGGGGCCACGACATCGAGGACGCATTGGTCGCCTGGTGGCGGCGCAAG 678
Query 37486 AACCCCGGGTGGCGGCTGTCCCGCGGCGAAGTCGCCTACACCAACGACGCCCTGACGTTC 37545
|||||||| |||| | || ||| || ||||||||||| || || |||| |||||
Sbjct 677 AACCCCGGATGGCAGACCAACCACGGGGAGATCGCCTACACCGACCCCGACCTGCCGTTC 618
Query 37546 CCGAACCTCGCGACCCTCGACCTCCGCGCCTCGCGCGGCCGC 37587
||||||| || ||||| |||| ||| ||| |||||||||
Sbjct 617 CCGAACCAGGCCACCCTGGACCGCCGGGCCCGCCGCGGCCGC 576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 153068149758600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |