Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value SEQ36764 311 5e-80 >SEQ36764 Length=622 Score = 311 bits (344), Expect = 5e-80 Identities = 355/472 (75%), Gaps = 6/472 (1%) Strand=Plus/Minus Query 1109 ATTGACCAGATCTCGGCCGCCGTGGAGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAAC 1168 || ||||||||| ||||| ||||| ||| || |||| |||||||| | ||| Sbjct 570 ATCGACCAGATCAGCACCGCCCTGGAGACGCTGAAGAAGAACCCGGACTCGCGGCTCAAC 511 Query 1169 GTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATC 1228 | || ||||| |||| |||| || ||| | | ||||| || | |||||||||| | Sbjct 510 CTCGTCTCCGCGTGGATCGTCTCCGAGCTCGACAATATGGCGCTGCCCCCGTGCCACCTG 451 Query 1229 ATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGC 1287 |||||||||| ||||||| |||||| ||| || |||| || |||||||||||||||| Sbjct 450 CTGTTCCAGCTCTACGTCGCCGACGGGACGCTGTC-CTGCCAGCTCTACCAGCGCAGCGC 392 Query 1288 GGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTT 1347 ||||||||||||||| ||||||||||| |||||||| |||||||| | | |||||||| Sbjct 391 GGACATGTTCCTCGGCGTGCCGTTCAACATCGCCTCCTACGCGCTGCGGACCCACATGTT 332 Query 1348 CGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACAT 1407 ||| |||||||| |||||| ||| || ||| | ||||||||||||||||||||||| Sbjct 331 CGCCCAGCAGGCGGGCCTGGAGGTCGGCGAGTGCGTGTGGACCGGCGGCGACTGCCACAT 272 Query 1408 CTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCG--ACGACCGCGGCCCTAC 1465 |||| ||| |||| ||||||||| || | ||||||| |||| | | |||| ||| | Sbjct 271 CTACGACATCCACCTCGACCAGGTGCGGCTGCAGCTGAGCCGGGAGGCCCGC--CCCGCC 214 Query 1466 CCGAGGCTCGTGCTACACCACGCGCCGTCGATCTTCGACTACCGGTACGAGCACATCCAC 1525 || | || ||| |||| || ||| || ||| |||| | | ||| ||||| | Sbjct 213 CCCACACTGACGCTGCACCGGGCACCGGACATGTTCAGCTACGGCTTCGACGACATCGAG 154 Query 1526 CTCGTGAACTACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGAT 1577 || ||||||||||||||| |||||||| |||||||| || |||| Sbjct 153 GTCACCGGCTACGACCCGCACCCCGGCATCAAGGCTCCGGTGGCGGTGTGAT 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295964802490605