Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031074.1
Length=92580
Score E
Sequences producing significant alignments: (Bits) Value
SEQ36764 311 5e-80
>SEQ36764
Length=622
Score = 311 bits (344), Expect = 5e-80
Identities = 355/472 (75%), Gaps = 6/472 (1%)
Strand=Plus/Minus
Query 1109 ATTGACCAGATCTCGGCCGCCGTGGAGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAAC 1168
|| ||||||||| ||||| ||||| ||| || |||| |||||||| | |||
Sbjct 570 ATCGACCAGATCAGCACCGCCCTGGAGACGCTGAAGAAGAACCCGGACTCGCGGCTCAAC 511
Query 1169 GTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATC 1228
| || ||||| |||| |||| || ||| | | ||||| || | |||||||||| |
Sbjct 510 CTCGTCTCCGCGTGGATCGTCTCCGAGCTCGACAATATGGCGCTGCCCCCGTGCCACCTG 451
Query 1229 ATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGC 1287
|||||||||| ||||||| |||||| ||| || |||| || ||||||||||||||||
Sbjct 450 CTGTTCCAGCTCTACGTCGCCGACGGGACGCTGTC-CTGCCAGCTCTACCAGCGCAGCGC 392
Query 1288 GGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTT 1347
||||||||||||||| ||||||||||| |||||||| |||||||| | | ||||||||
Sbjct 391 GGACATGTTCCTCGGCGTGCCGTTCAACATCGCCTCCTACGCGCTGCGGACCCACATGTT 332
Query 1348 CGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACAT 1407
||| |||||||| |||||| ||| || ||| | |||||||||||||||||||||||
Sbjct 331 CGCCCAGCAGGCGGGCCTGGAGGTCGGCGAGTGCGTGTGGACCGGCGGCGACTGCCACAT 272
Query 1408 CTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCG--ACGACCGCGGCCCTAC 1465
|||| ||| |||| ||||||||| || | ||||||| |||| | | |||| ||| |
Sbjct 271 CTACGACATCCACCTCGACCAGGTGCGGCTGCAGCTGAGCCGGGAGGCCCGC--CCCGCC 214
Query 1466 CCGAGGCTCGTGCTACACCACGCGCCGTCGATCTTCGACTACCGGTACGAGCACATCCAC 1525
|| | || ||| |||| || ||| || ||| |||| | | ||| ||||| |
Sbjct 213 CCCACACTGACGCTGCACCGGGCACCGGACATGTTCAGCTACGGCTTCGACGACATCGAG 154
Query 1526 CTCGTGAACTACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGAT 1577
|| ||||||||||||||| |||||||| |||||||| || ||||
Sbjct 153 GTCACCGGCTACGACCCGCACCCCGGCATCAAGGCTCCGGTGGCGGTGTGAT 102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 295964802490605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |