Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031078.1
Length=50082
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32872 587 2e-163
SEQ43235 111 5e-20
>SEQ32872
Length=2637
Score = 587 bits (650), Expect = 2e-163
Identities = 1205/1767 (68%), Gaps = 67/1767 (4%)
Strand=Plus/Minus
Query 38676 AGACCCTTGCG--GGTAGCTCCGGTCGAGTCGAAGGCACCGGCCTTGATCAAGGACTCGA 38733
|| |||||||| ||| || || ||||||||||| ||||||||||||| || |||
Sbjct 1828 AGGCCCTTGCGCGGGTGGCCGAGG--GAGTCGAAGGCGCCGGCCTTGATCAGTGAGTCGG 1771
Query 38734 TGGCACGCTTGCT-CA--CGGTCGCCTGAGTCGCAGCCT-TC-AGGAAGTCCGGCAGGGA 38788
|| | |||||| | || |||| || |||| | | | || ||| |||| | | |
Sbjct 1770 TGACGCGCTTGTTGCAGGCGGTGGC----GTCG-ATCTTGTCGAGGTAGTCGGAGAAGTC 1716
Query 38789 AGTGAACTTCCCCCAGGCTTCCCGGAGTTCGGCGATCTCCTGGACCATGCCCTCGCCCAC 38848
|||||||||||| | || || || |||| | ||| | | ||||||| ||
Sbjct 1715 CGTGAACTTCCCCTTCTCCTCGCGCGCCGCGATGATCGAGTCGACGACGTCCTCGCCGAC 1656
Query 38849 GTTCTTCACGGCGGTCAGCCCGAAGCGGATCTCCGTCTTCCCGTTCGGGGTGAAGGAGCT 38908
||| || ||| || ||||||||||| ||| || | ||| || | || |
Sbjct 1655 GTTGCGGACCGCGCCGAGGCCGAAGCGGATGTCC----TCGCCGACGGACTGGA--AGGT 1602
Query 38909 GTTCGAGACCGACACGT-------CGGGCGGCAGGACGTGAAGTCCCATCCGCCGTGCCT 38961
|| || | ||| ||| ||||| | || ||| | | || | | || |
Sbjct 1601 GT---AGGCGGACTCGTTGACGTCCGGGCTG-AGCACGCGCACCCCGAGGTGGCGGCAGT 1546
Query 38962 CGCCGAGGTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCGCCA 39021
|| ||||||| | || ||||| ||| | ||| ||||||||||||||| |||||||
Sbjct 1545 CGGCGAGGTAGATCGCGGACTTGTCCTTCTTGTCCGCCACCGAGGTGAGCAGCGCCGCCA 1486
Query 39022 TGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGACCGTACG 39081
|||||||||| | ||| ||| ||| ||||| || || | | || | ||||||||
Sbjct 1485 TGTACTCGGCGGTGTAATGCTCCTTGAGGTAGGCGGTCCAGAAGCTCACCAGACCGTAGC 1426
Query 39082 CCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCG 39141
| || | ||||| |||||||| ||||| |||||||| || | | | |||||||| |
Sbjct 1425 CGGCGGCGTGCGACTTGTTGAGCGCGTAGCCGGCGAACGGCAGCACCGTGTCCCACAGGG 1366
Query 39142 CCTGGATGGCACCGTCCGAGTAGCCTCGCTCGCGCGC-TCCCTTCTG-GAAGTTCACGAA 39199
|||||| ||| |||| |||||||| | | | | | || | | ||| || ||||
Sbjct 1365 CCTGGACGGCCTCGTCGGAGTAGCC--GTTGGACTTCATGCCGGCGGCGAACTTGTCGAA 1308
Query 39200 CTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGGCCTG 39259
|||||||||||| |||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1307 CTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCCTTGCGGAACCCGTCGGCCTC 1248
Query 39260 ACCCAGGCTGTACCCAGCGAGGATCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGATGAC 39319
||| | |||| |||| |||| | | || | |||||||||||| | ||
Sbjct 1247 ACCGGCGGTGTAGTTCGCGACCTTCTGCGAGATCCTCATGATCTGCTCCTGGTACACGAT 1188
Query 39320 CAGCCCGTAGGTCGGCCCCAGGATCTCGGCAAGCGGCTCCTCCACCTCGGGGTGGATCGG 39379
|| ||||||||| | ||||||| || | | ||| | | ||| |||||||||||
Sbjct 1187 GAGACCGTAGGTCTCCTCCAGGATGTCCTTGATGGACTCGGCGAGCTCCGGGTGGATCGG 1128
Query 39380 CGTGATCGCCTGCTGCCCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCACGCCCAT 39439
| ||||| || | |||||||||||| ||||||| | ||||| || || |||||
Sbjct 1127 CTCGATCGGCTTGCGGCCGTTCTTGCGGTCCGCGTAGTCCCAGTGCGCCCCGACACCCAT 1068
Query 39440 CGGACCCGGACGGTACAGCGCGACG-ACGGCGCTGATGTCCTCGAAGTTGTCCGGCTTCA 39498
||| ||||| ||||||||||| | | ||| | | ||||| | |||| | |||||||
Sbjct 1067 CGGGCCCGGCCGGTACAGCGCCAGGGACGCCACA-ATGTCGTTGAAGCCGGTGGGCTTCA 1009
Query 39499 GCAGGCGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGC 39558
| ||||||| |||| ||||| ||| |||||||||| ||||||||| |
Sbjct 1008 TGCGCTTGAGCAGTTCCTGCATGCCGCCGGAGTCCAGCTGGAAGATGCCGAGCGTGTCAC 949
Query 39559 CCCTGGCCAGCAGCTCGTAGGTAGCAACGTCGTCCAGCGGGATGTTCTCCAGGTCGACGT 39618
| | ||||||||| || |||| || |||||| || | |||||||||||||| ||
Sbjct 948 CGCGGGCCAGCAGTTCATAGGACGCCGGGTCGTCGGTCGACAGGTTCTCCAGGTCGAAGT 889
Query 39619 GCTCCCCACGGTTGGCGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGA 39678
||| || ||||| ||||||||| | |||| | |||| |||||||| || |
Sbjct 888 CCTCGCCCCGGTTCTTCTTGATGTTCTCCAGGCAGTCGGCGATGACGGTGAGGTTGCGCA 829
Query 39679 GCCCGAGGAAGTCCATCTTCACCGCGCCCAGGCTCTCGCACTGGGGGTAGTCCCA--CTG 39736
|||| |||||||||||||||| | ||| | | ||| || |||||| ||| | |
Sbjct 828 GCCCCAGGAAGTCCATCTTCAGCAGGCCGATGGCCTCACAGGCCGGGTAGGGCCAGCCGG 769
Query 39737 CG-TCACGGTCACGCCGTCCGCAGGGCGGACCCACACCGGGAGGTGATCGACCAACGGCT 39795
| ||| || ||||||| ||||| ||||| ||||| ||| |||| || ||||
Sbjct 768 TGATCAGGG---CGCCGTCGTTGGGGCGCTTCCACATCGGGATGTGGTCGAGCAGCGGCA 712
Query 39796 CGTTGGACATGATCACACCGGCCGCGTGAACGCCCATCTGCCGGACGAGACCTTCGAGCC 39855
| || ||||||||| || ||||| |||| ||| ||||| | || || || |
Sbjct 711 CCGAGGCCATGATCACTGCGCAGGCGTGGCCGCCGGCCTGGCGGACCACGCCCTCCAGGC 652
Query 39856 CGAGCGCAGTGTCGATGACCTGCTTCGAGTCCGGGTCGTTCTCGTACAGCCCACGGATCT 39915
|||| || |||| || || ||| |||| ||| ||||| || |||||||
Sbjct 651 CGAGGGCGTCGTCGTAGATCTCCTTGACCACCGGATCGGTCTCGATGAGGGTGCGGATCT 592
Query 39916 CGCCCGCCTCGTCGTAGCGCGGGTGCTCCGGGTTGAAGATGCCCTCCAGGGGCATCGAGT 39975
| | ||| || ||||||||||||||||||| | | |||||| || || || |
Sbjct 591 CCGCGGCCGCGCCGTAGCGCGGGTGCTCCGGATCCATGATGCC------GGACAGCGGGA 538
Query 39976 TGCCCAT---CACGTCGGCCGGGTAC---GCCTTGGTCAGCTTCTCGCCGACCTGGAA-- 40027
|| || | | | | |||||| | |||||||| | | ||| ||| ||||||
Sbjct 537 TGTCCTTCGCCGCCTGCGCCGGGGGCAGGGCCTTGGTGATCCGGTCGGCGATCTGGAAGC 478
Query 40028 -GGGCT---TGTCCAGCACGCGCGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGAC 40083
||||| || | |||| || |||||||| ||||| | | ||| | | |
Sbjct 477 CGGGCTGGCCGTGGTGGGCGCGGGCGGCGTCCTTGATCGCCTGCTTGGTCTTCACCGTGC 418
Query 40084 CGAAGGTCCCGATCTGTGCGACCTTGTCCGCCCCGTACTTCTCGGTGACGTACCTGATCA 40143
||||||| || ||| |||||||||||| | || | |||| || | |||| | |||||
Sbjct 417 CGAAGGTGATGACCTGGGCGACCTTGTCCTCGCCCCAGTTCTGGGCGGCGTAGCGGATCA 358
Query 40144 CGTCGCCCCGTCGCCGGTCAT---CGAAGTCGATGTCAACGTCGGGCATGGACACGCGCT 40200
||| |||||||||| ||||||||||||| | ||||| ||| ||| |
Sbjct 357 TCTCG---GAACGCCGGTCATCGGCGAAGTCGATGTCGATATCGGGGGCGGAGGGGCGTT 301
Query 40201 CGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGC 40260
| ||||| ||||| |||||||| || ||||||||| ||||||||| | || |||||
Sbjct 300 CCGGGTTGAGGAATCGCTCGAACATCAGCCCGTGCTCGATGGGGTCGATGTTGGTGATCG 241
Query 40261 CGAGGCAGTAGGCGACCAGCGAACCGGCAGCCGAGCCACGTCCGGGTCCGACCCACACGC 40320
|| |||||||||||| | ||||| || |||||||| || || ||||| | | ||
Sbjct 240 TCAGTGCGTAGGCGACCAGGGCGCCGGCGGCGGAGCCACGGCCCGGGCCGACGGAGATGC 181
Query 40321 CGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAACCCCA 40380
|| | ||| ||||| |||||||||||| ||||||||||||||| | |||
Sbjct 180 CGATGGAGCGGGCGTGCTTGATGAGGTCGGCGACGACGAGGAAGTAGGACGGGTAGCCCT 121
Query 40381 GCTGGATGATCATGTCGATCTCGTACT 40407
| | ||| | |||||||||||
Sbjct 120 TCATGTCGATGACACTGATCTCGTACT 94
>SEQ43235
Length=559
Score = 111 bits (122), Expect = 5e-20
Identities = 175/248 (71%), Gaps = 6/248 (2%)
Strand=Plus/Plus
Query 40765 AGTCGTTCGTGACCACGGGGGTGAGCGCGAGGTGCTTGCCCAGCCGGTAGAGGTCGTCGC 40824
||||||| ||||||| || | ||| |||||| | || | | | ||||||||| |
Sbjct 6 AGTCGTTGGTGACCAGCGGCGGGAGGGCGAGGCGGCGTCCGATCTCGAGGAGGTCGTCCC 65
Query 40825 GGACACGCCGCTCGATCTCCAGGCCGTGGTCCATGATCTCCAGGAAGTACCGGTCCCGAC 40884
|||| ||| |||||| ||||||||||||||||| ||| |||||||| ||| || |
Sbjct 66 GGACCCGCTTCTCGATGGACAGGCCGTGGTCCATGAGCTCGAGGAAGTAGTTGTCGCGGC 125
Query 40885 CGAAGACCTCCAG--GTACCGGC-CAGCCTCGGCAACGGCCTCGTCGTACTGCCCGAGGT 40941
|| ||| ||| | | || | | |||||| | ||||||| | |||| |||||
Sbjct 126 CGTAGATGTCCTGCCATTTCGCCGCGGCCTCG---AGCGCCTCGTTGAACTGGCCGAGCC 182
Query 40942 TGAGCCGGGTCATGATCGCACCGCCAGGGCATCCCGTGGTGACGATCAGGCCCTCGTTGT 41001
||||||||| | | | ||| ||||| || |||||| |||| ||| ||| ||
Sbjct 183 GCAGCCGGGTCTGCACCTCGCCGGAGGGGCAGCCGGTGGTGGCGATGCTGCCGTCGGCGT 242
Query 41002 GCTCGGCG 41009
||||||||
Sbjct 243 GCTCGGCG 250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160053123412440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |