Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value SEQ29447 123 3e-23 SEQ32872 118 1e-21 >SEQ29447 Length=7397 Score = 123 bits (136), Expect = 3e-23 Identities = 110/137 (80%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 79570 ATGTACGCCAACAACGCGGTGCCCGAGTCGCTGAACTTTCCGCACGACGCCATCGGGTCC 79629 |||||||||| ||| ||||| || ||||||||||||| ||||||||||| |||||| | Sbjct 5605 ATGTACGCCAGCAATGCGGTTCCGGAGTCGCTGAACTACCCGCACGACGCGATCGGGAGC 5546 Query 79630 GATCACGACTCGATCGGCCTGTTTCAGCAGCGCCCGTC---GTGGGGCACGGTGGCCCAG 79686 || || || || ||||| ||||| |||||||| | | | ||||||||| || || ||| Sbjct 5545 GACCATGATTCCATCGGTCTGTTCCAGCAGCGTCAGGCCGGGTGGGGCACCGTCGCACAG 5486 Query 79687 CGGATGAATCCGCGCGA 79703 || ||| |||||| ||| Sbjct 5485 CGTATGGATCCGCACGA 5469 >SEQ32872 Length=2637 Score = 118 bits (130), Expect = 1e-21 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 120466 CGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 120525 ||| ||||||||||| ||||||| ||| | |||||| |||||| || |||||| Sbjct 191 CGGCCCGGGCCGTGGCTCCGCCGCCGGCGCCCTGGTCGCCTACGCACTGACGATCACCAA 250 Query 120526 GATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGCCCCGA 120585 ||||| || ||| || ||| |||||||||||||| ||| |||||||||| |||||| Sbjct 251 CATCGACCCCATCGAGCACGGGCTGATGTTCGAGCGATTCCTCAACCCGGAACGCCCCTC 310 Query 120586 CTTTCCCGACATCGACGTCGACTTC 120610 | ||||| |||||| |||||||| Sbjct 311 CGCCCCCGATATCGACATCGACTTC 335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514727185231000