Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031099.1
Length=44536
Score E
Sequences producing significant alignments: (Bits) Value
SEQ24884 230 7e-56
SEQ27525 96.9 1e-15
>SEQ24884
Length=1939
Score = 230 bits (254), Expect = 7e-56
Identities = 312/428 (73%), Gaps = 14/428 (3%)
Strand=Plus/Minus
Query 19943 CGGCGATGAACAACGCGATGATCGCCGC-GGGCTGC--ACCACGTTGAACCGGGCGGCGA 19999
||||| | || ||||||| ||||||| ||| || ||| || || |||||||||
Sbjct 1490 CGGCGTTCAATGCCGCGATGGTCGCCGCCGGGGTGACTACCGCGCTG---CGGGCGGCGC 1434
Query 20000 TGTGGTGCGCGCAGATCGGGCACGAATCCGCAGGCCTGGTCTACATGGAAGAGATCGACG 20059
||||||||||||||||| ||||| || || || || |||||||| || ||| ||
Sbjct 1433 ACTGGTGCGCGCAGATCGGTCACGAGTCGGCGGGACTCCGGTACATGGAGGAACTCGCCG 1374
Query 20060 ACGGGCAGCGGTACAACGGGCGAGCGGATCTCGGCAACACACAGCCCGGAGATGGGCCGC 20119
|||| | ||| | ||||| | || ||||||||||| |||||||| ||||||| |
Sbjct 1373 ACGGCTCGGCCTACGAGGGGCGCTCCGACCTCGGCAACACGCAGCCCGGTGATGGGCAGA 1314
Query 20120 GCTACAAGGGGTCTGGTCCGATCCAGCTGACCGGCCGCAGCAACTTCCGCGAGTTCTCGC 20179
| | ||||||||| || ||||||||||| ||||| || |||||||| | |||| | |
Sbjct 1313 GGTTCAAGGGGTCCGGCCCGATCCAGCTCACCGGGCGGGCGAACTTCCGGGCGTTCACTC 1254
Query 20180 GGT-GGTGCTTCTCGAAGGGCTGGACACCGACGCCGCGCTATTTCGAGGACATGCCGTAT 20238
||| || || | | |||| | ||||||| | | ||||||| |||| |
Sbjct 1253 GGTGGGCGCAGC-AGCAGGGAT--TCACCGAC----CTGGACTTCGAGGCGCAGCCGGAG 1201
Query 20239 CTCGTTCGCGAGGAACCGAAGTGGGGGTTCCTCGCGGCGTCCTGGTATTGGACCGTCGCC 20298
|| || ||| ||| || ||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 1200 CTGGTGCGCTCGGATCCACGGTGGGGGTTCCTCGCCGCGTCCTGGTACTGGACGGTCGCC 1141
Query 20299 CGCCCGGGCATCAACGCGATGTGCGATCGGCAGGACGTTCACGGCGTCACCAAGGCGATC 20358
|||||| | |||||||| ||||||| | | || || | ||||||| | |||||
Sbjct 1140 CGCCCGAACCTCAACGCGCAGTGCGATGCGGATGATGTCGTGGCCGTCACCCGGTCGATC 1081
Query 20359 AACGGCGG 20366
||||||||
Sbjct 1080 AACGGCGG 1073
>SEQ27525
Length=13899
Score = 96.9 bits (106), Expect = 1e-15
Identities = 184/260 (71%), Gaps = 21/260 (8%)
Strand=Plus/Minus
Query 3086 GCGTCAGGCGATCGAGTACCACGACAAGCAGATGGCTCTCGCCGCGCTCGCGCACTTCCT 3145
|||| ||||||||| ||||||||| | |||||| || | ||| |||||||||||
Sbjct 9813 GCGTGAGGCGATCGCCTACCACGACTCGATGATGGCGAAGGCGGTGCTGGCGCACTTCCT 9754
Query 3146 GAACCTTGA---CAAGGGCGGATCGTACGCTCTCGCTTCGGTTCTCAAGTCG---CCGTT 3199
||||||||| ||||||||| || ||||| || | ||| | ||||| | |||
Sbjct 9753 GAACCTTGAGGGCAAGGGCGGCTCCTACGCCCTGG---CGGAGACCCAGTCGGATCTGTT 9697
Query 3200 CGACCAGTCGCTGGGGTCGATCGCCGACGGGGTTCGCTCGACAGC-CCAGGC-GCACGTC 3257
| |||||||||| | | ||||| ||| || | || |||| | ||| | |||| ||
Sbjct 9696 CATCCAGTCGCTGCAGACCATCGCGGAC-TGGATAGC-GGACACCGCCACCCAGCACATC 9639
Query 3258 CTCGAGGACCTCGTGGACGTCAACTGGGGACCGGATAT-----GCCGGCGCCGCGGCTCG 3312
| || |||||||| ||| || || |||||||| | |||||||||| |||
Sbjct 9638 GTGGAAGACCTCGTTGACATC-GCT-TTCCCCGGATATGAGGGGGTGGCGCCGCGGATCG 9581
Query 3313 TGTTCGACGAGATCGGCCAG 3332
|| ||||| |||| |||||
Sbjct 9580 TGGTCGACCCGATC-GCCAG 9562
Score = 86.0 bits (94), Expect = 2e-12
Identities = 310/480 (65%), Gaps = 24/480 (5%)
Strand=Plus/Minus
Query 4039 GAGCTGCTGATCTATGACGAGATCGATCCGTTCTGGGGCGTCGCCGCCGCGGAGCTGGTC 4098
|||||||||||||| | ||||||| |||| ||| || || || |||||
Sbjct 9232 GAGCTGCTGATCTACGGAGAGATCG------GGTGGGAGGTCAACGACGGCGACGTGGTC 9179
Query 4099 CGCGAGCTCGCGCGGATCGACGCCGACCGCGAGCTGAAGGTGCGCATCAACTCGCCCGGC 4158
|| || ||||| || | || ||| || || | || ||||||||| |||||
Sbjct 9178 CGACAGATCGCGGACATGGCCGGCGA---AGACCTCACTGTCCGCATCAACAGCCCCGGT 9122
Query 4159 GGTGACGTCTACGAGGGCATCGCGATCCTCAACGCGCTCCGCGGCCGCGACGGCAAAGTC 4218
|| || |||||| |||| | |||||| | |||||||| || || |||||||| ||
Sbjct 9121 GGCGATGTCTACCAGGGGCTGGCGATCATGAACGCGCTGCGATCCCACGACGGCACGGTG 9062
Query 4219 ACCACCGTCGTCGACGGCCTCGCTGCGTCGATTGCCAGCGTCATTGC-GATGGC--CGGA 4275
||| | || || || ||| | || || ||| || | |||| || | ||| ||
Sbjct 9061 ACCGCGGTGGTGGAGGGCATGGCCGCATCGGCAGCATCCTTCATCGCTGTCGGCGGCGCG 9002
Query 4276 TCCGAGATCGTCATGATGCCGAACTCGGAGATGATGATTCACGATCCGTGGATGCTGACC 4335
||| | || ||| || | | ||||| | ||||| ||||| | |||| |
Sbjct 9001 TCCCGTGTGGTGATGCGCCCCACCGCGGAGCTAATGATCCACGAAGC---GATGTCTTTC 8945
Query 4336 ATCGGCG---ATGCCGAGGACATGCAGACCGCGGCTGACAATCTCGGTCGCATTGCCGAC 4392
|||||| | |||| ||| ||||||| ||| || |||| | || || | |
Sbjct 8944 GTCGGCGGGAACGCCGGGGAGATGCAGAAGGCGATCGAGGATCTGGACCGGATCTCTGCG 8885
Query 4393 AATCTCGCCTCGATCTACGCCGACCGCACCGGCGGTACGGCCGAGGAGTGGCG---AGCG 4449
|| || ||| ||||| || || ||| | ||||| | | ||| ||||||| |||
Sbjct 8884 AACCTGGCCGGCATCTATGCGGAGCGCGCTGGCGGCGAGCCGGAGCAGTGGCGTGACGCG 8825
Query 4450 ATCATGCGCGCCGAAACCTGGTACACCGCGGCCGAAACCGTCGAGGCCGGGCTCGCCGAC 4509
|| | | || || || ||||| | ||| || |||| || || |||||||| |||
Sbjct 8824 ATGAAG---GCGGAGACGTGGTATTCGGCGCAGGAGGCCGTGGATGCGGGGCTCGCTGAC 8768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142315639948980
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