Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value SEQ36764 104 4e-17 SEQ35086 86.0 1e-11 >SEQ36764 Length=622 Score = 104 bits (114), Expect = 4e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 196749 CTGTCCTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATC 196808 |||||||| ||||| ||||||||||| || ||| | |||||||| || |||||||||||| Sbjct 420 CTGTCCTGCCAGCTCTACCAGCGCAGCGCGGACATGTTCCTCGGCGTGCCGTTCAACATC 361 Query 196809 GCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGAT 196868 || || ||||| ||| | |||||| | || ||||||| ||| || || || Sbjct 360 GCCTCCTACGCGCTGCGGACCCACATGTTCGCCCAGCAGGCGGGCCTGGAGGTCGGCGAG 301 Query 196869 TTCGTCTGGACGGGCGGCGA 196888 | ||| ||||| |||||||| Sbjct 300 TGCGTGTGGACCGGCGGCGA 281 >SEQ35086 Length=1045 Score = 86.0 bits (94), Expect = 1e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130 ||||| |||||||| |||||| | | |||| ||||||||||| ||||| | Sbjct 211 GACCGCACCGGCACCGGCACCCGCAGCCTCTTCGCCCGGCAGATGCGTTTCCACCTGGCC 152 Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190 | || |||||||| || ||||||||||| ||||||||| || ||| || |||||| Sbjct 151 GAGGGATTCCCGCTCATCGCCACCAAAAAGGTGCACCTGCACTCCATCGTCGGTGAACTG 92 Query 196191 TTGTGGTTCCTGAACGGCGACACCA 196215 ||||| ||||| | ||||||| Sbjct 91 CTGTGGATCCTGCGGGCGGACACCA 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769863262331800