Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value SEQ28394 163 2e-35 >SEQ28394 Length=656 Score = 163 bits (180), Expect = 2e-35 Identities = 276/400 (69%), Gaps = 0/400 (0%) Strand=Plus/Plus Query 63336 CGGTAGGTCGCATCCAGCAGCGTCCACGCCAGTTTGGCGCGCCAGGCGGGCGCAAATTGC 63395 |||||||| || |||||||||||||| |||| | ||||||| | |||| || | Sbjct 171 CGGTAGGTGGCGTCCAGCAGCGTCCAGGCCATATGCAGGCGCCAGTCCAGCGCGAACTCT 230 Query 63396 TGATCCCATCCCAGTTCGACCCCGCGGCGGCGCGTCTTGCCCGCGTTCTGATAGGACGTA 63455 |||||| ||||||| | ||||| || || || ||||| ||||| ||| || Sbjct 231 TGATCCAGCGCCAGTTCCAGGCCGCGCCGCCGGGTTTTGCCGGCGTTGGCGTAGCTGGTG 290 Query 63456 CGGCCATTGTCGCTGGCGGCAACGACAATTTCATTTTTCGTGTCCGTATTGAAGACGCTC 63515 || ||| | ||| | || || || | || || | || || || | ||| | | Sbjct 291 CGCCCACCGCTGCTTTCCGCCACCACCAGCTCGTTGTCGGTATCGGTCTGGAACAGGGCG 350 Query 63516 AGGCTCGCCATCCCGGTGCCCACCTGCCATTTACTGCCTGCTTCAACGGTGGTGTTAGTG 63575 |||| ||| ||| |||| | || ||| ||||| || |||||| | | ||| Sbjct 351 GCGCTCACCAGGCCGTTGCCGAGGCGCAGTTTGCTGCCCAGCTCGACGGTGTCGCTGGTG 410 Query 63576 GCCGGTTGCAGAGCAAAGTTAAGCCCGGACTGACCATCGGGACGATAGGACAGCTCGTTA 63635 | ||| |||||| | | ||| || |||| ||| || | ||| |||||||| || ||||| Sbjct 411 GACGGCTGCAGACCGATGTTCAGGCCGGCCTGGCCGTTGGGGCGATAGGAGAGTTCGTTG 470 Query 63636 ATGGTCGGCGTTTCAAATCCCCTCCCGGCAGAGAGGTAAACGTTCCACTGCGGCGTCATG 63695 |||||||| |||||||| || | ||||| ||||| |||||||||||| ||| | || Sbjct 471 ATGGTCGGGGTTTCAAAGCCGCGGCCGGCTGAGAGATAAACGTTCCACGCCGGATTGATT 530 Query 63696 GCATACTTCAGCGCTGCCGCCGGAAGCCACTTGTGATAGC 63735 ||| || |||| || ||| ||||||| ||| |||| Sbjct 531 TTATAGTTGAGCGAGCCCATCGGCAGCCACTGGTGGTAGC 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330713266188430