Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031234.1 Length=43982 Score E Sequences producing significant alignments: (Bits) Value SEQ29447 140 9e-29 >SEQ29447 Length=7397 Score = 140 bits (154), Expect = 9e-29 Identities = 195/270 (72%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 13517 ATCAAGATGTACGCTAACGCTGCGGTTCCGGACTCGCTGAAGTTCCCGCACGACGCGGTT 13576 || ||||||||||| | | |||||||||||| |||||||| | ||||||||||||| | Sbjct 5611 ATGAAGATGTACGCCAGCAATGCGGTTCCGGAGTCGCTGAACTACCCGCACGACGCGATC 5552 Query 13577 GGTTCAGACCACGACTCGGTGGGTCTCTACCAGCAGCGCCAGGCAGGTTGGGGGACTCTC 13636 || ||||| || || | ||||| | ||||||||| ||||| || ||||| || || Sbjct 5551 GGGAGCGACCATGATTCCATCGGTCTGTTCCAGCAGCGTCAGGCCGGGTGGGGCACCGTC 5492 Query 13637 GCCCAGCGTATG--TCAGCATTCGAGTCGAGCAAGTTGTTCTTGAATGCGATGACGAAGA 13694 || ||||||||| || ||| ||| | | | |||| || |||||| | || Sbjct 5491 GCACAGCGTATGGATCCGCACGACAGT-GCG-TCGATGTTTTTCGCCGCGATGCTGCGGA 5434 Query 13695 AGTTCCCGAACTGGGCGTCCATGCCGAAGGGTGAGGTCGCTCAGGGAGTTCAGGTCTCCG 13754 |||||||||||||| ||| ||| || | || || ||||| || |||||||| | Sbjct 5433 AGTTCCCGAACTGGCAGTCGATGGACCCCGGCGCCGTGGCGCAGGGTGTGCAGGTCTCGG 5374 Query 13755 CCTTCCCGGATCGCTATGCGACCAAGATGG 13784 | || ||||| || || |||||||||| Sbjct 5373 CATTTCCGGACCGGTACAACACCAAGATGG 5344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140543810551440