Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031250.1 Length=52437 Score E Sequences producing significant alignments: (Bits) Value SEQ41464 147 7e-31 >SEQ41464 Length=761 Score = 147 bits (162), Expect = 7e-31 Identities = 228/326 (70%), Gaps = 0/326 (0%) Strand=Plus/Minus Query 17251 ACGCCAGGTGTTATTCCGTTCTCCAACATTTATAACCCTGATTCTAAGCAGTTCGATGGT 17310 ||||| || || || |||||||||||||||||| | | || | |||||||||||| Sbjct 574 ACGCCGGGCGTCATGCCGTTCTCCAACATTTATCAGGCGGACAGCCAACAGTTCGATGGT 515 Query 17311 TGGCACGGTATACCTTACCCTGGCTATCAGTATCCGTTTGTCTTTACGCATGACGATACT 17370 |||||||| || ||||| || ||||| ||||| ||||| | || ||| | || | Sbjct 514 TGGCACGGCATGCCTTATCCGGGCTACCAGTACCCGTTCATTTTCGTGCACGCCGCCGCC 455 Query 17371 GCAGCAGGTACAATCAGGCTGAACAACATGGTTAACTTTTTGTACGATTCTCAGCAATGG 17430 | | | | | ||| ||||||||||| | ||| ||| | || ||||| ||| Sbjct 454 GATCCCGACGGGGTGATGCTCAACAACATGGTCGAGTTTCTGTGGCAGTCGCAGCAGTGG 395 Query 17431 TACTTTAAGAAGTTTGGTCAGCTAGGTCCTGGCGCATCTGCTTTTATCTGGAACCGTTGG 17490 || || | || || ||| || || ||||||| || | |||||||||||||||| Sbjct 394 TATCAGCAGCAATTCGGCGTGCTGGGCCCCAGCGCATCGGCCTATATCTGGAACCGTTGG 335 Query 17491 GATAACTTTAAATACGGTGTACCTGATACGTTTACCATGTATCACTGGGGTAATGGTAGT 17550 || || | | |||||| | ||||| | |||||||||||||||||| | || | Sbjct 334 GACAATCTGAGTTACGGTCCGGCGGATACCTGGACCATGTATCACTGGGGTGACGGCACG 275 Query 17551 GCATGGTCAGGTTACCAGCCTCGTGC 17576 || ||||| || || ||||| || || Sbjct 274 GCCTGGTCCGGCTATCAGCCACGCGC 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167584997475990