Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031252.1 Length=51290 Score E Sequences producing significant alignments: (Bits) Value SEQ32968 98.7 3e-16 >SEQ32968 Length=2597 Score = 98.7 bits (108), Expect = 3e-16 Identities = 193/279 (69%), Gaps = 10/279 (4%) Strand=Plus/Minus Query 30956 GGTTCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGT 31015 ||| |||||| |||| || |||||||||||| ||||| || || || || Sbjct 2139 GGTACACGCCCAGTGGCGCGGCGGTCGCGAACTTCCGCGTCGCGTCAACGCCCCGTCGGT 2080 Query 31016 TCGA-TCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGC-GCTGCTGT 31073 |||| |||| |||| ||| ||||| ||||| ||| | || ||||| || || | || Sbjct 2079 TCGACTCGA-AGTCGAACCAGTGGGTCGACGGGGAGGCACTGTTCCTCAGCTGCAAC-GT 2022 Query 31074 CTGGCGCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGA---GGTCAT 31130 ||||||| || | || ||||| ||||| | |||||||| ||||| ||| || || Sbjct 2021 CTGGCGCCAGGCCGCCGAGAACGTCGCGAACTCCCTGCACAAGGG---GGACCGCGTGAT 1965 Query 31131 CTGCGTCGGGCGTCTGAAGTCGCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACTGT 31190 | | ||| || ||| ||| |||||| || ||||| ||||||||||| || Sbjct 1964 CGTCTCCGGCCGGCTGCGCCAGCGGTCCTACGAAACCCGTGAGGGTGAGAAGCGCACCGT 1905 Query 31191 CATCGAGCTCGAAGTCGACAGCATCGGCCCGTCGCTGCG 31229 ||||| | || |||||| |||||||||| || || Sbjct 1904 GTTCGAGGTGGAGGTCGACGAGGTCGGCCCGTCTCTCCG 1866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163916607008520