Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031252.1
Length=51290
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32968 98.7 3e-16
>SEQ32968
Length=2597
Score = 98.7 bits (108), Expect = 3e-16
Identities = 193/279 (69%), Gaps = 10/279 (4%)
Strand=Plus/Minus
Query 30956 GGTTCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGT 31015
||| |||||| |||| || |||||||||||| ||||| || || || ||
Sbjct 2139 GGTACACGCCCAGTGGCGCGGCGGTCGCGAACTTCCGCGTCGCGTCAACGCCCCGTCGGT 2080
Query 31016 TCGA-TCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGC-GCTGCTGT 31073
|||| |||| |||| ||| ||||| ||||| ||| | || ||||| || || | ||
Sbjct 2079 TCGACTCGA-AGTCGAACCAGTGGGTCGACGGGGAGGCACTGTTCCTCAGCTGCAAC-GT 2022
Query 31074 CTGGCGCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGA---GGTCAT 31130
||||||| || | || ||||| ||||| | |||||||| ||||| ||| || ||
Sbjct 2021 CTGGCGCCAGGCCGCCGAGAACGTCGCGAACTCCCTGCACAAGGG---GGACCGCGTGAT 1965
Query 31131 CTGCGTCGGGCGTCTGAAGTCGCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACTGT 31190
| | ||| || ||| ||| |||||| || ||||| ||||||||||| ||
Sbjct 1964 CGTCTCCGGCCGGCTGCGCCAGCGGTCCTACGAAACCCGTGAGGGTGAGAAGCGCACCGT 1905
Query 31191 CATCGAGCTCGAAGTCGACAGCATCGGCCCGTCGCTGCG 31229
||||| | || |||||| |||||||||| || ||
Sbjct 1904 GTTCGAGGTGGAGGTCGACGAGGTCGGCCCGTCTCTCCG 1866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163916607008520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |