Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031261.1 Length=48670 Score E Sequences producing significant alignments: (Bits) Value SEQ27525 84.2 7e-12 >SEQ27525 Length=13899 Score = 84.2 bits (92), Expect = 7e-12 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 3000 GCGATCGAGTACCACGACCACCAGATGGCGCTTGTCGCCCTGGCGCATTTCCTCAACCTC 3059 ||||||| ||||||||| ||||||| | | |||||||| ||||| ||||| Sbjct 9806 GCGATCGCCTACCACGACTCGATGATGGCGAAGGCGGTGCTGGCGCACTTCCTGAACCTT 9747 Query 3060 GACGGCAAGGGCGGCAGCTACGCGCTCGCCAGCGTGCAGGCCGACACGTTCGTGCAGTCG 3119 || |||||||||||| |||||| || || ||| | || |||| | |||||| Sbjct 9746 GAGGGCAAGGGCGGCTCCTACGCCCTGGCGGAGACCCAGTCGGATCTGTTCATCCAGTCG 9687 Query 3120 GTGCAGACCGTCGCCGACGAGATCCGCGACGTCGCGCAGGC-GCACGTCGTCGAGGACAT 3178 |||||||| |||| ||| ||| ||| ||| || | |||| |||| || ||| | Sbjct 9686 CTGCAGACCATCGCGGACTGGATAGCGGACACCGC-CACCCAGCACATCGTGGAAGACCT 9628 Query 3179 CGTTGACGTC 3188 ||||||| || Sbjct 9627 CGTTGACATC 9618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155537197222320