Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031265.1
Length=49894
Score E
Sequences producing significant alignments: (Bits) Value
SEQ29447 201 4e-47
SEQ26880 104 7e-18
SEQ27525 98.7 3e-16
>SEQ29447
Length=7397
Score = 201 bits (222), Expect = 4e-47
Identities = 257/349 (74%), Gaps = 5/349 (1%)
Strand=Plus/Minus
Query 15120 GCGACGGCGCTCGTCGAGGTGGGCGACCCGATGAAGATGTACGCCAACACCGCCGTCCCG 15179
|||||||| || || ||| ||| |||||||||||||||||||||| || || || |||
Sbjct 5641 GCGACGGCACTGGTGGAGTCGGGTGACCCGATGAAGATGTACGCCAGCAATGCGGTTCCG 5582
Query 15180 GAATCGCTGAAGTTCCCGCACGACGCCGTCGGTTCCGACCACGACTCGATCGGCCTGTTC 15239
|| |||||||| | |||||||||||| |||| |||||| || || ||||| ||||||
Sbjct 5581 GAGTCGCTGAACTACCCGCACGACGCGATCGGGAGCGACCATGATTCCATCGGTCTGTTC 5522
Query 15240 CAGCAGCGGCAGGCAGGGTGGGGGACCGTCGCCGACCGGATGGATCCGCACCGCTCGGCG 15299
|||||||| ||||| |||||||| |||||||| | || |||||||||||| | |||
Sbjct 5521 CAGCAGCGTCAGGCCGGGTGGGGCACCGTCGCACAGCGTATGGATCCGCACGACAGTGCG 5462
Query 15300 AAGATGTTCTTCGACGCACTGAT--GAAGGTTCCCG-GCTGGGAAACGATGGACATGGGT 15356
|||||| |||| ||| || | | | ||||||| |||| | |||||||| ||
Sbjct 5461 TCGATGTTTTTCGCCGCGATGCTGCGGAAGTTCCCGAACTGGCAGTCGATGGACCCCGGC 5402
Query 15357 GCCGCGGCACAGGCGGTGCAGCGCAGCGCATTCCCCGGGAAGTACGCCGAGAGGATGCCG 15416
|||| ||| |||| |||||| | ||||| || | |||| | | ||||
Sbjct 5401 GCCGTGGCGCAGGGTGTGCAGGTCTCGGCATTTCCGGACCGGTACAACACCAAGATGGGT 5342
Query 15417 CGGGCGACGGAGCTCGTCGACAAGTTC-GGCATCTACGACCAGGGCGGC 15464
|||| |||||||| | || | | ||| | |||||||||||||||
Sbjct 5341 AGGGCTGAAGAGCTCGTTG-CATCTGCGGGCCTGTACGACCAGGGCGGC 5294
>SEQ26880
Length=5820
Score = 104 bits (114), Expect = 7e-18
Identities = 126/170 (74%), Gaps = 5/170 (3%)
Strand=Plus/Minus
Query 15150 ATGAAGATGTACGCCAACACCGCCGTCCCGGAATCGCTGAAGTTCCCGCACGACGCCGTC 15209
|||||||||||||||||| | || || || || || |||| ||||| ||||| || |||
Sbjct 1517 ATGAAGATGTACGCCAACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTC 1458
Query 15210 GGTTCCGACCACGACTCGATCGGCCTGTTCCAGCAGCGGCA----GGCAGGGTGGGGGAC 15265
|| |||| |||||| ||||||| ||||||||||| | ||| | |||||| ||
Sbjct 1457 GGCGGCGACGCGGACTCGGTCGGCCTTTTCCAGCAGCGCGACAATGGC-GCGTGGGGCAC 1399
Query 15266 CGTCGCCGACCGGATGGATCCGCACCGCTCGGCGAAGATGTTCTTCGACG 15315
| ||| ||||| ||||| || | || || || ||||||| |||||
Sbjct 1398 CATCGAAGACCGCATGGACCCTGAGCGGTCCGCCGGAATGTTCTACGACG 1349
>SEQ27525
Length=13899
Score = 98.7 bits (108), Expect = 3e-16
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 2841 GCGATCGCATACCACGACAACATGATCGCGATCGCCGGTCTCGCCCACTTCCTCAACCTC 2900
|||||||| ||||||||| ||||| |||| || | || || |||||||| |||||
Sbjct 9806 GCGATCGCCTACCACGACTCGATGATGGCGAAGGCGGTGCTGGCGCACTTCCTGAACCTT 9747
Query 2901 GAGGGAAAGGGCGGCTCGTACGCACTGGCCAGCGTCCAGGAGCACACGTTCTCCCAGTCG 2960
||||| ||||||||||| ||||| ||||| |||| | | |||| |||||||
Sbjct 9746 GAGGGCAAGGGCGGCTCCTACGCCCTGGCGGAGACCCAGTCGGATCTGTTCATCCAGTCG 9687
Query 2961 GTGCAGACCGTCGGCGAGCAGACCCGCGACATAGGCAACGCGCACGTCATCGAGGACCTC 3020
|||||||| ||| || || |||| | || | |||| || | || ||||||
Sbjct 9686 CTGCAGACCATCGCGGACTGGATAGCGGACACCGCCACCCAGCACATCGTGGAAGACCTC 9627
Query 3021 GTCGACATC 3029
|| ||||||
Sbjct 9626 GTTGACATC 9618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159451852786560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |