Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031265.1 Length=49894 Score E Sequences producing significant alignments: (Bits) Value SEQ29447 201 4e-47 SEQ26880 104 7e-18 SEQ27525 98.7 3e-16 >SEQ29447 Length=7397 Score = 201 bits (222), Expect = 4e-47 Identities = 257/349 (74%), Gaps = 5/349 (1%) Strand=Plus/Minus Query 15120 GCGACGGCGCTCGTCGAGGTGGGCGACCCGATGAAGATGTACGCCAACACCGCCGTCCCG 15179 |||||||| || || ||| ||| |||||||||||||||||||||| || || || ||| Sbjct 5641 GCGACGGCACTGGTGGAGTCGGGTGACCCGATGAAGATGTACGCCAGCAATGCGGTTCCG 5582 Query 15180 GAATCGCTGAAGTTCCCGCACGACGCCGTCGGTTCCGACCACGACTCGATCGGCCTGTTC 15239 || |||||||| | |||||||||||| |||| |||||| || || ||||| |||||| Sbjct 5581 GAGTCGCTGAACTACCCGCACGACGCGATCGGGAGCGACCATGATTCCATCGGTCTGTTC 5522 Query 15240 CAGCAGCGGCAGGCAGGGTGGGGGACCGTCGCCGACCGGATGGATCCGCACCGCTCGGCG 15299 |||||||| ||||| |||||||| |||||||| | || |||||||||||| | ||| Sbjct 5521 CAGCAGCGTCAGGCCGGGTGGGGCACCGTCGCACAGCGTATGGATCCGCACGACAGTGCG 5462 Query 15300 AAGATGTTCTTCGACGCACTGAT--GAAGGTTCCCG-GCTGGGAAACGATGGACATGGGT 15356 |||||| |||| ||| || | | | ||||||| |||| | |||||||| || Sbjct 5461 TCGATGTTTTTCGCCGCGATGCTGCGGAAGTTCCCGAACTGGCAGTCGATGGACCCCGGC 5402 Query 15357 GCCGCGGCACAGGCGGTGCAGCGCAGCGCATTCCCCGGGAAGTACGCCGAGAGGATGCCG 15416 |||| ||| |||| |||||| | ||||| || | |||| | | |||| Sbjct 5401 GCCGTGGCGCAGGGTGTGCAGGTCTCGGCATTTCCGGACCGGTACAACACCAAGATGGGT 5342 Query 15417 CGGGCGACGGAGCTCGTCGACAAGTTC-GGCATCTACGACCAGGGCGGC 15464 |||| |||||||| | || | | ||| | ||||||||||||||| Sbjct 5341 AGGGCTGAAGAGCTCGTTG-CATCTGCGGGCCTGTACGACCAGGGCGGC 5294 >SEQ26880 Length=5820 Score = 104 bits (114), Expect = 7e-18 Identities = 126/170 (74%), Gaps = 5/170 (3%) Strand=Plus/Minus Query 15150 ATGAAGATGTACGCCAACACCGCCGTCCCGGAATCGCTGAAGTTCCCGCACGACGCCGTC 15209 |||||||||||||||||| | || || || || || |||| ||||| ||||| || ||| Sbjct 1517 ATGAAGATGTACGCCAACCCGGCGGTGCCTGAGTCCATGAACTTCCCCCACGATGCGGTC 1458 Query 15210 GGTTCCGACCACGACTCGATCGGCCTGTTCCAGCAGCGGCA----GGCAGGGTGGGGGAC 15265 || |||| |||||| ||||||| ||||||||||| | ||| | |||||| || Sbjct 1457 GGCGGCGACGCGGACTCGGTCGGCCTTTTCCAGCAGCGCGACAATGGC-GCGTGGGGCAC 1399 Query 15266 CGTCGCCGACCGGATGGATCCGCACCGCTCGGCGAAGATGTTCTTCGACG 15315 | ||| ||||| ||||| || | || || || ||||||| ||||| Sbjct 1398 CATCGAAGACCGCATGGACCCTGAGCGGTCCGCCGGAATGTTCTACGACG 1349 >SEQ27525 Length=13899 Score = 98.7 bits (108), Expect = 3e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 2841 GCGATCGCATACCACGACAACATGATCGCGATCGCCGGTCTCGCCCACTTCCTCAACCTC 2900 |||||||| ||||||||| ||||| |||| || | || || |||||||| ||||| Sbjct 9806 GCGATCGCCTACCACGACTCGATGATGGCGAAGGCGGTGCTGGCGCACTTCCTGAACCTT 9747 Query 2901 GAGGGAAAGGGCGGCTCGTACGCACTGGCCAGCGTCCAGGAGCACACGTTCTCCCAGTCG 2960 ||||| ||||||||||| ||||| ||||| |||| | | |||| ||||||| Sbjct 9746 GAGGGCAAGGGCGGCTCCTACGCCCTGGCGGAGACCCAGTCGGATCTGTTCATCCAGTCG 9687 Query 2961 GTGCAGACCGTCGGCGAGCAGACCCGCGACATAGGCAACGCGCACGTCATCGAGGACCTC 3020 |||||||| ||| || || |||| | || | |||| || | || |||||| Sbjct 9686 CTGCAGACCATCGCGGACTGGATAGCGGACACCGCCACCCAGCACATCGTGGAAGACCTC 9627 Query 3021 GTCGACATC 3029 || |||||| Sbjct 9626 GTTGACATC 9618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159451852786560