Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 113 1e-19 seq4710 107 4e-18 seq4983 87.8 4e-12 >SEQ10860 Length=7223 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||||||||||||||| |||||||||| | ||| | ||||||||| | || ||| Sbjct 1484 GTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCCAATTGCTTGCCG 1543 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || ||||| | | ||| || || | | |||||||| || || ||||| || |||| Sbjct 1544 GCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 1603 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | | | || || || || |||||||| || || || |||||||| || Sbjct 1604 ACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTT 1663 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||||| ||||| Sbjct 1664 TTAACGAAGATTTGCAT 1680 >seq4710 Length=78879 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151904 AAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTT 151963 ||| || ||||| || ||||||||||| || | | ||| | ||||| || || || Sbjct 8630 AAGGGTCGACTCCTTCTGGATGTTGTAGTCTGACAGAGTGCGACCATCCTCCAGCTGCTT 8689 Query 151964 CCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTG 152023 || |||||||| || | |||||| || | | |||||||||||| ||||| || || Sbjct 8690 GCCAGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGATCTTAGC 8749 Query 152024 TTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAG 152083 || ||| |||| | | | || || ||| || || || || || || || || || || Sbjct 8750 CTTCACATTCTCAATGGTATCAGATGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAG 8809 Query 152084 AGTCTTCACGAAGACCTGCATTTT 152107 ||||||||||||| |||||||| Sbjct 8810 GGTCTTCACGAAGATTTGCATTTT 8833 >seq4983 Length=3163 Score = 87.8 bits (96), Expect = 4e-12 Identities = 151/216 (70%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| |||| | || | |||||||| | Sbjct 664 CAAG-TGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCTTCCA 722 Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| ||||||||||| | | |||||| || | | || || ||||| || || Sbjct 723 ACTGCTTT--CCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTG 780 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || ||||| |||| | | | || || ||| || || | ||||| || || Sbjct 781 GATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACCTCCAAGGTAATGGTCTT 840 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110 ||| || | ||||| || |||| |||||| || || Sbjct 841 GCCAGTCAATGTCTTTACAAAGATCTGCATATTTCC 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153139214616455