Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value SEQ10860 172 1e-37 seq4983 145 2e-29 seq4710 136 8e-27 seq735 105 1e-17 SEQ34196 95.1 3e-14 SEQ22161 95.1 3e-14 SEQ16087 95.1 3e-14 seq2170 95.1 3e-14 seq1317 95.1 3e-14 >SEQ10860 Length=7223 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || ||||| || |||| || || || ||||||||||| ||||| || | Sbjct 1453 ACCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGA 1512 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || | ||| || ||||||||||||||||| ||||| || || Sbjct 1513 AAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGG 1572 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || ||||| || ||||| ||||| || | || || || ||||| | |||||| Sbjct 1573 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGAC 1632 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||||||||| | || |||||||| || ||||| Sbjct 1633 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680 >seq4983 Length=3163 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || |||| || | || || || |||||||||||||| | Sbjct 644 CCACCACGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAG 703 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || ||||| || | || || ||||| ||||||||||| || || || ||| Sbjct 704 AGGGTACGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 763 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| || || ||| | ||||| || || || | || || Sbjct 764 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACC 823 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | || || ||||| || ||||| ||||| || || |||||||| || Sbjct 824 TCCAAGGTAATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCATATT 873 Score = 86.0 bits (94), Expect = 1e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 |||||| || || ||| | ||||||||||| || | |||||| || | ||||| ||||| Sbjct 553 GATCTTGGCCTTGACGTTCTCGATAGTGTCAGAGGGTTCGACCTCCAAGGTGATGGTCTT 612 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| ||||| ||||| ||||| |||||||| Sbjct 613 ACCAGTCAAGGTCTTGACGAAGATCTGCAT 642 >seq4710 Length=78879 Score = 136 bits (150), Expect = 8e-27 Identities = 170/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTT-TCTTTTTGGATGTTGTAGTCAG 282930 |||||||||||| || || |||| || || | | || || |||||||||||||| | Sbjct 8602 ACCACCACGCAGACGCAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTCTG 8661 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 || ||||| |||||||| || || || || || ||||| | ||| || || || | Sbjct 8662 ACAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGG 8721 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || || ||||||||||||||||| || || || | || || || || || | || | Sbjct 8722 GGATTCCTTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTATCAGATGGCTCCA 8781 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 | || || ||||| ||||| || |||| ||||| ||||| || |||||||| Sbjct 8782 CCTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCATTTT 8833 >seq735 Length=17191 Score = 105 bits (116), Expect = 1e-17 Identities = 345/530 (65%), Gaps = 12/530 (2%) Strand=Plus/Minus Query 273525 TTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTCATCAGTCGCTCCACATTACCA 273584 ||||||||||| |||| | | ||||| || || |||| || | ||| || Sbjct 11911 TTGTACCACGGAATCATTGTTGTTTGCGGTTCGCCGTTGATCATGCGACGTAAATTCTCA 11852 Query 273585 ATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAA 273644 ||||| || |||||||||| | | | || || ||||| ||||| |||||||| | Sbjct 11851 ATAATTTCGCGAGGGTTGTAATTGGCTATTTTAGTTGACCAGCCGGTACCAATACCTTCA 11792 Query 273645 GAACCATTCACCAGAATAC--TCGGGATAATTGGGACATAATATTCGGGCTCAATTTTAT 273702 | || || || | |||| | || ||||| || | ||| || ||||||||||| | Sbjct 11791 GCGCCGTTGACTA--ATACCATGGGTATAATAGGTATATACCATGTCGGCTCAATTTTTT 11734 Query 273703 CACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCG 273762 ||||||||| | |||| || || | ||| ||| | | ||||| || | Sbjct 11733 GGCCATCGTCGACCTGATACTGCATTAATGGATCGTCCAAAGGATGGAAAATGAGACGTG 11674 Query 273763 TCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCA 273822 | | || || | ||||||||||||| | || || ||| || || ||||| | Sbjct 11673 TTAGTGGCGACATTATCGTGAAAATGTAACGAGCGCTTGCACAATCTTTTCCACCGGTGA 11614 Query 273823 GCCTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAAT 273882 | | | ||| || ||||| ||| || | | || |||||||| || || || | Sbjct 11613 GACGAGTACCGAATTGACCGCGTGGCTCTAACAAATTAATGTTGTTCGATCCCACATAGT 11554 Query 273883 CCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTG- 273941 ||| |||| |||||| || ||| || || || || || || || ||||| || || Sbjct 11553 TCTGCGCCAAATTCACAATGGTCATTTGCAGCGAGACTTCACCATGATGATA--CGATGA 11496 Query 273942 -TGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACAT--CGCTCGTCAAGTTTCGC 273998 |||||| | |||| | ||| |||||||| || | |||| |||| || ||| Sbjct 11495 CATTTCGGCAACGGAACCCGACAGCTGGGCAACCTTAACTTCACGCTTGTCA--TTACGC 11438 Query 273999 TTGAATGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAAC 274048 || || | | ||| ||||||||||| ||||| || ||||| || Sbjct 11437 TTAAAACACGTAAACATAACCTTCCGCTGACCAGGCTTTAAGCCATCTAC 11388 >SEQ34196 Length=1104 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 555 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 611 >SEQ22161 Length=3272 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2735 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 2791 >SEQ16087 Length=3448 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2993 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3049 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 3436 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3380 >seq2170 Length=10872 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 9059 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 9003 >seq1317 Length=6343 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 3238 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046120869892670