Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
SEQ10860 172 1e-37
seq4983 145 2e-29
seq4710 136 8e-27
seq735 105 1e-17
SEQ34196 95.1 3e-14
SEQ22161 95.1 3e-14
SEQ16087 95.1 3e-14
seq2170 95.1 3e-14
seq1317 95.1 3e-14
>SEQ10860
Length=7223
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || ||||| || |||| || || || ||||||||||| ||||| || |
Sbjct 1453 ACCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGA 1512
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| ||||| || | ||| || ||||||||||||||||| ||||| || ||
Sbjct 1513 AAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGG 1572
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || || ||||| || ||||| ||||| || | || || || ||||| | ||||||
Sbjct 1573 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGAC 1632
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||||||||| | || |||||||| || |||||
Sbjct 1633 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680
>seq4983
Length=3163
Score = 145 bits (160), Expect = 2e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || |||| || | || || || |||||||||||||| |
Sbjct 644 CCACCACGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAG 703
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || ||||| || | || || ||||| ||||||||||| || || || |||
Sbjct 704 AGGGTACGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 763
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||||||||| |||||||| || || ||| | ||||| || || || | || ||
Sbjct 764 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACC 823
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| | || || ||||| || ||||| ||||| || || |||||||| ||
Sbjct 824 TCCAAGGTAATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCATATT 873
Score = 86.0 bits (94), Expect = 1e-11
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|||||| || || ||| | ||||||||||| || | |||||| || | ||||| |||||
Sbjct 553 GATCTTGGCCTTGACGTTCTCGATAGTGTCAGAGGGTTCGACCTCCAAGGTGATGGTCTT 612
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| ||||| ||||| ||||| ||||||||
Sbjct 613 ACCAGTCAAGGTCTTGACGAAGATCTGCAT 642
>seq4710
Length=78879
Score = 136 bits (150), Expect = 8e-27
Identities = 170/232 (73%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTT-TCTTTTTGGATGTTGTAGTCAG 282930
|||||||||||| || || |||| || || | | || || |||||||||||||| |
Sbjct 8602 ACCACCACGCAGACGCAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTCTG 8661
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|| ||||| |||||||| || || || || || ||||| | ||| || || || |
Sbjct 8662 ACAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGG 8721
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
| || || ||||||||||||||||| || || || | || || || || || | || |
Sbjct 8722 GGATTCCTTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTATCAGATGGCTCCA 8781
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
| || || ||||| ||||| || |||| ||||| ||||| || ||||||||
Sbjct 8782 CCTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCATTTT 8833
>seq735
Length=17191
Score = 105 bits (116), Expect = 1e-17
Identities = 345/530 (65%), Gaps = 12/530 (2%)
Strand=Plus/Minus
Query 273525 TTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTCATCAGTCGCTCCACATTACCA 273584
||||||||||| |||| | | ||||| || || |||| || | ||| ||
Sbjct 11911 TTGTACCACGGAATCATTGTTGTTTGCGGTTCGCCGTTGATCATGCGACGTAAATTCTCA 11852
Query 273585 ATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAA 273644
||||| || |||||||||| | | | || || ||||| ||||| |||||||| |
Sbjct 11851 ATAATTTCGCGAGGGTTGTAATTGGCTATTTTAGTTGACCAGCCGGTACCAATACCTTCA 11792
Query 273645 GAACCATTCACCAGAATAC--TCGGGATAATTGGGACATAATATTCGGGCTCAATTTTAT 273702
| || || || | |||| | || ||||| || | ||| || ||||||||||| |
Sbjct 11791 GCGCCGTTGACTA--ATACCATGGGTATAATAGGTATATACCATGTCGGCTCAATTTTTT 11734
Query 273703 CACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCG 273762
||||||||| | |||| || || | ||| ||| | | ||||| || |
Sbjct 11733 GGCCATCGTCGACCTGATACTGCATTAATGGATCGTCCAAAGGATGGAAAATGAGACGTG 11674
Query 273763 TCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCA 273822
| | || || | ||||||||||||| | || || ||| || || ||||| |
Sbjct 11673 TTAGTGGCGACATTATCGTGAAAATGTAACGAGCGCTTGCACAATCTTTTCCACCGGTGA 11614
Query 273823 GCCTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAAT 273882
| | | ||| || ||||| ||| || | | || |||||||| || || || |
Sbjct 11613 GACGAGTACCGAATTGACCGCGTGGCTCTAACAAATTAATGTTGTTCGATCCCACATAGT 11554
Query 273883 CCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTG- 273941
||| |||| |||||| || ||| || || || || || || || ||||| || ||
Sbjct 11553 TCTGCGCCAAATTCACAATGGTCATTTGCAGCGAGACTTCACCATGATGATA--CGATGA 11496
Query 273942 -TGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACAT--CGCTCGTCAAGTTTCGC 273998
|||||| | |||| | ||| |||||||| || | |||| |||| || |||
Sbjct 11495 CATTTCGGCAACGGAACCCGACAGCTGGGCAACCTTAACTTCACGCTTGTCA--TTACGC 11438
Query 273999 TTGAATGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAAC 274048
|| || | | ||| ||||||||||| ||||| || ||||| ||
Sbjct 11437 TTAAAACACGTAAACATAACCTTCCGCTGACCAGGCTTTAAGCCATCTAC 11388
>SEQ34196
Length=1104
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 555 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 611
>SEQ22161
Length=3272
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 2735 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 2791
>SEQ16087
Length=3448
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 2993 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3049
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 3436 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3380
>seq2170
Length=10872
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 9059 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 9003
>seq1317
Length=6343
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 3238 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046120869892670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |