Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2872 188 7e-43 >seq2872 Length=9359 Score = 188 bits (208), Expect = 7e-43 Identities = 461/696 (66%), Gaps = 2/696 (0%) Strand=Plus/Plus Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATT 23394 || || | ||| || ||||| || ||||||| |||||| | || |||| || || || Sbjct 3104 AATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGTTCATGCCAATC 3163 Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATT 23454 | || || || | |||||| | ||| | ||||| | |||||||| | || Sbjct 3164 AAGTTGACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAGCATCCGTTATG 3223 Query 23455 ATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACAT-GC 23513 |||| || || ||| |||||| | | |||| | |||| ||| || || Sbjct 3224 ATTTCAATGATGCGTTCCCGACTAGGCCGCTGCACCAAATGTTGGAACA-TAAGCACCGC 3282 Query 23514 AAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGG 23573 ||| |||||||| || |||||||| | | |||||||| || || ||||| | ||| || Sbjct 3283 AAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATGTAAGTCCAGG 3342 Query 23574 CATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACC 23633 ||| | ||| || || || | ||| || || | ||||| || ||||| || || Sbjct 3343 CATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAGCTCCCACTGAAGAAGATGCC 3402 Query 23634 CTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCA 23693 |||||||| ||||| || | || |||| |||||| | ||| | ||| ||||| Sbjct 3403 TTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTCGAAGAGATCCA 3462 Query 23694 tttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAG 23753 | ||| | |||||| || ||| | || |||||||| || || ||||| Sbjct 3463 AGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAATGGCATTGAAGAG 3522 Query 23754 AAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGA 23813 | | | | | | ||| | ||||| || ||||| || | ||| |||||||| || Sbjct 3523 ATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTGTACATTTCGGA 3582 Query 23814 ATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAAC 23873 ||| | ||| || || |||||||| || |||||||| || | || || | || || || Sbjct 3583 ATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCGGTCACCTGCAC 3642 Query 23874 ATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAA 23933 || | ||| | || | | ||||||||||||||| |||||| |||||||||||| Sbjct 3643 TTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAAGCAGCAAAGAA 3702 Query 23934 AGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAAT 23993 || | |||| ||| ||||| | |||| | | | || ||||||| | || Sbjct 3703 GGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCCCAATCAGTCAT 3762 Query 23994 ATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || || || | ||| ||||| || || ||||| || Sbjct 3763 GTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAA 3798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521187459947000