Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq2872 188 7e-43
>seq2872
Length=9359
Score = 188 bits (208), Expect = 7e-43
Identities = 461/696 (66%), Gaps = 2/696 (0%)
Strand=Plus/Plus
Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATT 23394
|| || | ||| || ||||| || ||||||| |||||| | || |||| || || ||
Sbjct 3104 AATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGTTCATGCCAATC 3163
Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATT 23454
| || || || | |||||| | ||| | ||||| | |||||||| | ||
Sbjct 3164 AAGTTGACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAGCATCCGTTATG 3223
Query 23455 ATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACAT-GC 23513
|||| || || ||| |||||| | | |||| | |||| ||| || ||
Sbjct 3224 ATTTCAATGATGCGTTCCCGACTAGGCCGCTGCACCAAATGTTGGAACA-TAAGCACCGC 3282
Query 23514 AAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGG 23573
||| |||||||| || |||||||| | | |||||||| || || ||||| | ||| ||
Sbjct 3283 AAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATGTAAGTCCAGG 3342
Query 23574 CATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACC 23633
||| | ||| || || || | ||| || || | ||||| || ||||| || ||
Sbjct 3343 CATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAGCTCCCACTGAAGAAGATGCC 3402
Query 23634 CTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCA 23693
|||||||| ||||| || | || |||| |||||| | ||| | ||| |||||
Sbjct 3403 TTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTCGAAGAGATCCA 3462
Query 23694 tttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAG 23753
| ||| | |||||| || ||| | || |||||||| || || |||||
Sbjct 3463 AGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAATGGCATTGAAGAG 3522
Query 23754 AAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGA 23813
| | | | | | ||| | ||||| || ||||| || | ||| |||||||| ||
Sbjct 3523 ATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTGTACATTTCGGA 3582
Query 23814 ATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAAC 23873
||| | ||| || || |||||||| || |||||||| || | || || | || || ||
Sbjct 3583 ATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCGGTCACCTGCAC 3642
Query 23874 ATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAA 23933
|| | ||| | || | | ||||||||||||||| |||||| ||||||||||||
Sbjct 3643 TTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAAGCAGCAAAGAA 3702
Query 23934 AGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAAT 23993
|| | |||| ||| ||||| | |||| | | | || ||||||| | ||
Sbjct 3703 GGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCCCAATCAGTCAT 3762
Query 23994 ATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029
|| || || | ||| ||||| || || ||||| ||
Sbjct 3763 GTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAA 3798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521187459947000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |