Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4710 138 8e-28 SEQ10860 136 3e-27 seq4983 136 3e-27 >seq4710 Length=78879 Score = 138 bits (152), Expect = 8e-28 Identities = 170/231 (74%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTG-AAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 || || || | ||| | || ||||| ||| ||| || |||||| ||||||||||| || Sbjct 8600 ATACCACCACGCAGACGCAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTC 8659 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || || ||||| | |||||||||||||| Sbjct 8660 TGACAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGG 8719 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| || ||||| ||||| | | ||||| || | | || Sbjct 8720 GGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTATCAGATGGCTC 8779 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || |||||||| || ||||||||||||||||||||||| Sbjct 8780 CACCTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCAT 8830 >SEQ10860 Length=7223 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| | || ||| |||||||| |||||||||| || |||| | || || Sbjct 1471 CACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTC 1530 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| |||||||||||||||||||| ||||||| ||| | ||||| || ||| Sbjct 1531 CAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTG 1590 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| || | || | ||||| || | | ||| ||||| | || || ||||| Sbjct 1591 AATCTTGGCTTTGACATTTTCAATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTT 1650 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || |||||||||||||| Sbjct 1651 ACCCGTGAGGGTTTTAACGAAGATTTGCAT 1680 >seq4983 Length=3163 Score = 136 bits (150), Expect = 3e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||||| |||||| || |||||| ||||||||||| || Sbjct 640 CATGCCACCACGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTC 699 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| || | || |||| |||||| ||||| |||||||||||||||||||||| Sbjct 700 GGAGAGGGTACGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGG 759 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||| ||||| ||| ||||| || | | |||| | ||||| || | || | Sbjct 760 GGGAATACCCTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCGATGGTATCAGAGGGCT 818 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||| ||||| ||||| || || | ||||| || ||||| ||||| Sbjct 819 CAACCTCCAAGGTAATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359788119706785