Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
SEQ10860 159 8e-34
seq4710 136 1e-26
seq4983 118 3e-21
>SEQ10860
Length=7223
Score = 159 bits (176), Expect = 8e-34
Identities = 159/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||| ||||| || || || ||||| || ||||| ||| || ||
Sbjct 1677 CAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCGGAT 1618
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || |||||| ||||||||||||||||||||||| ||||| || || ||
Sbjct 1617 ACCATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAACAG 1558
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| ||||| || || | |||||||| | |||||| ||||||| || ||
Sbjct 1557 CGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATTACAATATC 1498
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|||||||| || ||| |||| ||||
Sbjct 1497 CAAAAAGAGTCTACATTGCA-CTTG 1474
>seq4710
Length=78879
Score = 136 bits (150), Expect = 1e-26
Identities = 156/209 (75%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971
|| ||||||| |||| |||||||| || || || ||||| || |||||||| ||||||
Sbjct 8836 GTCAAAATGC---AAATCTTCGTGAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTG 8780
Query 177972 GAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031
|| || || ||||| ||||| || || ||||| || ||||| |||||||||||
Sbjct 8779 GAGCCATCTGATACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAAGGAATCCCC 8720
Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091
|| || ||||| || || |||||||| || || ||||| || ||||| | ||||| |
Sbjct 8719 CCAGATCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCA 8660
Query 178092 GATTATAACGTCCAAAAAGAATCAACACT 178120
|| || ||| |||| || || || || ||
Sbjct 8659 GACTACAACATCCAGAAGGAGTCGACCCT 8631
>seq4983
Length=3163
Score = 118 bits (130), Expect = 3e-21
Identities = 150/205 (73%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || | || || || || || ||| | ||||| || ||| ||
Sbjct 867 CAGATCTTTGTAAAGACATTGACTGGCAAGACCATTACCTTGGAGGTTGAGCCCTCTGAT 808
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||||||||| ||||| |||||||| || || || || || || |||||
Sbjct 807 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAGCAG 748
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||||||||| ||| | |||||||| | || || |||| || ||| ||
Sbjct 747 CGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGTACCCTCTCCGACTACAACATC 688
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || ||||| || || ||||
Sbjct 687 CAGAAGGAGTCAACCCTTCA-CTTG 664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203020131529370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |