Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq4 91.5 2e-13
>seq4
Length=22154029
Score = 91.5 bits (100), Expect = 2e-13
Identities = 179/257 (70%), Gaps = 6/257 (2%)
Strand=Plus/Minus
Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTGTCGTGGAGTCCT 118995
||||| || || ||||| || |||| | || |||||||| || |||||| | ||
Sbjct 611963 TTCATATAGCGAATCTTACCGAATATCGCGCGTTCCTTCCAGCCTTGGTCGTGAATGCCA 611904
Query 118996 GCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACTCGTACTT 119054
| | | ||| | || || ||||| || || ||||| || || | ||| ||||||
Sbjct 611903 CCGATGGACCACATGCAACCAACGTAGCCATTCGGATCGCGCCCATCCAGACT-GTACTT 611845
Query 119055 ATCGTTTAAGTAG-ATAC-AGACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGT 119112
|||||| || ||| || | | || || | ||| ||||| || | ||||||| |
Sbjct 611844 ATCGTTCAA-TAGTATGCTATACTCT-AGCGCCTGCTCCGGCGTTTCGGTCCATTCTAAA 611787
Query 119113 AtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGA 119172
|| ||||| ||||| ||||| || || | ||||||||||| ||||| || | || |||
Sbjct 611786 ATCTTTTTGGCCCAATACATGCGCAAGAAACCGTGCATTTTGCCCTCCTTCACCAGCTGT 611727
Query 119173 AGTTGTGCGGTGTTCCA 119189
|| || || | ||||||
Sbjct 611726 AGCTGGGCCGAGTTCCA 611710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511362919747960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |