Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09] 8,053 sequences; 115,885,644 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 >seq3 Length=21835025 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | || || |||| ||||| ||||| || || ||| || | Sbjct 1955260 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCATCC 1955319 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||| || ||| || || ||||| | ||| |||||| Sbjct 1955320 GATACCATTGAGAACGTGAAGGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAG 1955379 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | || ||||| || ||||| |||||||||||| || || ||||||||||| Sbjct 1955380 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGATGGTCGCACCTTGTCCGATTACAAT 1955439 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 ||||||||||| ||||||||||| |||| |||| Sbjct 1955440 ATTCAGAAGGAGTCTACTCTTCATTTGGTTCTACG 1955474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428293960561715