Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq962 95.1 2e-14
seq4 93.3 9e-14
seq1 89.7 1e-12
seq5403 87.8 4e-12
>seq962
Length=9828
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 8285 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 8344
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 8345 AGCCCCACGTTGGGC 8359
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 5336 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5277
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 5276 CCCACGTTGGGC 5265
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 6824 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 6765
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 6764 CCCACGTTGGGC 6753
>seq4
Length=22154029
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 17565223 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 17565282
Query 142564 CCCACATCGGGCAGAAGT 142581
||||| | |||| |||||
Sbjct 17565283 CCCACGTTGGGC-GAAGT 17565299
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 833779 ATGGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 833838
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 833839 AGCCCCACGTTGGGC 833853
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 834109 ATGGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 834168
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 834169 AGCCCCACGTTGGGC 834183
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||| || ||||||| ||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 16673755 TGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGAT 16673814
Query 142112 CCCCGCCAGAGA 142123
|||||| || ||
Sbjct 16673815 CCCCGCAAGGGA 16673826
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 20394361 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 20394420
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 20394421 CCCACGTTGGGC 20394432
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 21393208 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 21393267
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 21393268 CCCACGTTGGGC 21393279
>seq1
Length=24697304
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 20272304 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 20272363
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 20272364 CCCACGTTGGGC 20272375
>seq5403
Length=1245
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 932 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCCCAGGGTCGTGGGTTCGAG 991
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 992 CCCCACGTTGGGC 1004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027730748762573
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |