Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 3e-21
seq2 100 2e-16
>seq3
Length=21835025
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | | ||| ||||| | ||||| || || ||||| ||||||||| |
Sbjct 1955486 CCACCACGCAGACGTAGAACCAAATGAAGAGTAGACTCCTTCTGAATATTGTAATCGGAC 1955427
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || ||| |||||| ||||| || || ||| |||| |||||||| || || || |||
Sbjct 1955426 AAGGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 1955367
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|||||||| ||||| |||||| || | | |||| ||| |||| | || ||
Sbjct 1955366 ATGCCTTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCAATGGTATCGGATGGCTCCACC 1955307
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | || ||||| ||||| || || || || || |||||
Sbjct 1955306 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 1955260
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | ||| | || || || || || || ||||| ||
Sbjct 1955087 ATACCACCACGCAGACGGAGGACCAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCA 1955028
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| ||| |||||| ||||| || || ||| |||| |||||||| || || ||
Sbjct 1955027 GACAAAGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 1954968
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| || || |||||| || | | |||| ||| |||| | ||
Sbjct 1954967 GGAATGCCTTCCTTATCTTGAATCTTGGCCTTGACGTTCTCAATGGTATCGGAAGGCTCA 1954908
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || || |||| |||||| || || ||||||||
Sbjct 1954907 ACCTCCAGGGTGATGGTCTTTCCCGTCAAAGTTTTAACGAAGATCTGCAT 1954858
>seq2
Length=4222574
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | ||||| || | || || || || ||||||||||| |||
Sbjct 180298 ATGCCACCACGCAGACGGAGCACTAAGTGCAAAGTGGACTCCTTCTGAATGTTGTAGTCG 180239
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||| || || || || || || |||| |||||||| || || ||
Sbjct 180238 GATAGAGTGCGTCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGT 180179
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||||||||| ||||| || | | || | |||||| | || |||
Sbjct 180178 GGGATCCCTTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGGCTCG 180119
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || |||||||| |||||||| || || || |||||
Sbjct 180118 ACCTCCAAGGTAATGGTCTTGCCGGTGAGAGTTTTMACGAAGATTTGCAT 180069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420093165515436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |