Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 2e-15
>seq3
Length=21835025
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008
|||||| |||| | || ||| |||||||| ||||| || || || || |||||||||
Sbjct 1955487 GCCACCACGCAGACGTAGAACCAAATGAAGAGTAGACTCCTTCTGAATATTGTAATCG-- 1955430
Query 15009 GAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066
|| || || | ||||| | ||| ||||| ||| | |||| |||||| || ||
Sbjct 1955429 GACAAGGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 1955370
Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126
||||| ||||||||||| ||| || || || | || || |||||| ||
Sbjct 1955369 GGAATGCCTTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCAATGGTATCGGATGGCTCC 1955310
Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || | || ||||| || || ||||| || || || || |||||||||
Sbjct 1955309 ACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCATA 1955259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357356923427105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |