Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4 167 4e-36
>seq4
Length=22154029
Score = 167 bits (184), Expect = 4e-36
Identities = 491/746 (66%), Gaps = 23/746 (3%)
Strand=Plus/Plus
Query 159644 ACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAAT 159703
|| ||||||||||||||||| || ||||| |||| || || |||||||| ||||
Sbjct 3240339 ACTTTCTTCTCGAAAAAGTTAGTTTTGCCATCCAGCGAGATCATCTCCATGAAGGTGAAT 3240398
Query 159704 GGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACA 159763
|| |||||| | ||| || || ||||| || |||||| | || ||||||
Sbjct 3240399 GGATTCTTCGTATTGTAGATTTTGCCAACACCGAGTTCCACCAGCAGACGATCCGCCACA 3240458
Query 159764 AATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCT 159823
||||| || || ||||| |||| || || || | || | ||||| || ||
Sbjct 3240459 AATTCAATATATTGGGACATCAATGCACAATTCATGCCAATCAAATTGACGGGCAGAGCA 3240518
Query 159824 TCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGA-GACACGTTC 159882
|| | |||||||| | |||||| || || || | | ||||| ||| || ||| ||
Sbjct 3240519 TCTGTGAGAAACTCTTGCTCAATGGTAACAGCATCCGAGATAATCT-CGATGATACGCTC 3240577
Query 159883 GTACCCCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGC 159940
| ||| |||| | ||||| | |||| | | |||||||| || |||
Sbjct 3240578 CCGGCTGGGCCGTTGCACCAAATGCCGG-----AACATCATGACAGCAAAGTCACAATGC 3240632
Query 159941 AGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGC 160000
| |||||||| || ||||| ||||| ||||| | | || || ||||| | ||||||
Sbjct 3240633 AAGCCCTCGTCGCGTGAGATCAACTCATTGGAGAACGTCAGACCTGGCATCAGACCACGC 3240692
Query 160001 GGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCA 160060
|| |||||||| || | ||||| ||||| || ||||| ||||||||||| |||
Sbjct 3240693 TTCTTCAGCCAAAAGATCGAGGCAAAGCTTCCGCTGAAGAAGATTCCCTCCACGGCAGCA 3240752
Query 160061 AACGCCACGAGCCTCTCACCAAA---AGAGGCGTTGGTGTCATG-GGTCCACCTTTTGGC 160116
||||| | | ||||| ||||| | || || | ||| |||| ||
Sbjct 3240753 AACGCGATAATTCTCTCGCCAAAGTTCGCCGCCTTCG----ATGAAATCCAAGAGAGCGC 3240808
Query 160117 CCATTCAGCCTTCTTTGC--GATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCC 160174
||| ||||||| || || || ||||| || | ||| || |||| |||
Sbjct 3240809 CCAATCAGCCT--TTCGCTTGACAGCGGGCATTGTTTCAATGGCATTGAACAGATAATCC 3240866
Query 160175 TGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACA 160234
| || |||| | || ||| | |||||| |||||| || | |||||||
Sbjct 3240867 CTTTGCTGTGGATCCCTAATATATGTATCGATCAGCACGCTGTACATCTCCGAGTGCACA 3240926
Query 160235 TTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATA-CTGCACCTCCTG 160293
|| || ||||| || |||||| |||||| | | || | | || |||||||||||
Sbjct 3240927 TTCTCCATGGCAATTTGAAAGCCATAGAAACAACGAG-CTTCGGTTATTTGCACCTCCTG 3240985
Query 160294 TGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAA 160353
|||| | | ||||||| ||||||| | || |||| ||| |||||||| || |
Sbjct 3240986 GCTGAAGCGCTCGACCAGATTCTCATTAACAATGCCATCGGAGGCGGCAAAGAAGGCGAG 3241045
Query 160354 CACGTGAGAGATGAAATGTCTCTCGT 160379
||| || ||||| || || | |||||
Sbjct 3241046 CACATGCGAGATAAAGTGACGCTCGT 3241071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795075157689680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |