Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09] 8,053 sequences; 115,885,644 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3 113 2e-19 >seq3 Length=21835025 Score = 113 bits (124), Expect = 2e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||||||||| |||| || || || || || || || ||||| | || Sbjct 1954857 AATGCAGATCTTCGTTAAAACTTTGACGGGAAAGACCATCACCCTGGAGGTTGAGCCTTC 1954916 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| |||||| | || || ||||||||||||||||| ||||| || ||||| Sbjct 1954917 CGATACCATTGAGAACGTCAAGGCCAAGATTCAAGATAAGGAAGGCATTCCCCCAGATCA 1954976 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || ||| | || || ||||| |||||||| | |||||| | || || || Sbjct 1954977 GCAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGATGGTCGCACTTTGTCTGACTACAA 1955036 Query 391229 TATTGATAAGGA 391240 ||| | ||||| Sbjct 1955037 TATCCAGAAGGA 1955048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975514547227724