Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09] 8,053 sequences; 115,885,644 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 9e-11 >seq3 Length=21835025 Score = 82.4 bits (90), Expect = 9e-11 Identities = 161/234 (69%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 9366 CCCACGGCATCAATCTCATCAATGAAGACAATACATGGT---TGATTTTCGCGGGCGATT 9422 ||||| || || || || |||||||| | ||| || || || ||| || || || Sbjct 3037113 CCCACAGCGTCGATTTCGTCAATGAACAAAATGCAAGGCGCGTGCTTT---CGTGCCATG 3037057 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482 |||| | ||||| || | | |||||| || ||||||||||||| ||| | | | Sbjct 3037056 GCAAACATGTCGCGCACTCGGGACGGGCCCACGCCGACAAACATCTCCAGAAACTCCGAG 3036997 Query 9483 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9541 |||| || | ||||||||| ||||| | || || || |||| ||| || ||||| Sbjct 3036996 CCGGAGACGGT-GATGAAGGGCACATTCGCCTCGCCAGCTGTGGCCTTGGCCAGCAGAGT 3036938 Query 9542 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 || || ||||| ||| ||| | || | ||||||| || || |||||||| Sbjct 3036937 TTTGCCTGTACCGGGCGGACCGGTCAGCATGGCACCCTTCGGTATTTTGGCGCC 3036884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589921411057720