Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq3 82.4 9e-11
>seq3
Length=21835025
Score = 82.4 bits (90), Expect = 9e-11
Identities = 161/234 (69%), Gaps = 8/234 (3%)
Strand=Plus/Minus
Query 9366 CCCACGGCATCAATCTCATCAATGAAGACAATACATGGT---TGATTTTCGCGGGCGATT 9422
||||| || || || || |||||||| | ||| || || || ||| || || ||
Sbjct 3037113 CCCACAGCGTCGATTTCGTCAATGAACAAAATGCAAGGCGCGTGCTTT---CGTGCCATG 3037057
Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482
|||| | ||||| || | | |||||| || ||||||||||||| ||| | | |
Sbjct 3037056 GCAAACATGTCGCGCACTCGGGACGGGCCCACGCCGACAAACATCTCCAGAAACTCCGAG 3036997
Query 9483 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9541
|||| || | ||||||||| ||||| | || || || |||| ||| || |||||
Sbjct 3036996 CCGGAGACGGT-GATGAAGGGCACATTCGCCTCGCCAGCTGTGGCCTTGGCCAGCAGAGT 3036938
Query 9542 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
|| || ||||| ||| ||| | || | ||||||| || || ||||||||
Sbjct 3036937 TTTGCCTGTACCGGGCGGACCGGTCAGCATGGCACCCTTCGGTATTTTGGCGCC 3036884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589921411057720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |