Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq3 165 2e-35
seq2 147 5e-30
>seq3
Length=21835025
Score = 165 bits (182), Expect = 2e-35
Identities = 167/216 (77%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || || ||||| || || |||||||| || | | ||| | ||||||||
Sbjct 1955066 ACCAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTGCGACCATCTTCC 1955007
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || |||||||| || || || || ||||| ||||||||||| || ||||||
Sbjct 1955006 AGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTATCTTGA 1954947
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||||||||||||||| || ||| || || || ||||| | ||||||
Sbjct 1954946 ATCTTGGCCTTGACGTTCTCAATGGTATCGGAAGGCTCAACCTCCAGGGTGATGGTCTTT 1954887
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTTATGGT 195147
|| ||||||||||| ||||| | ||||||| ||||
Sbjct 1954886 CCCGTCAAAGTTTTAACGAAGATCTGCATTT-TGGT 1954852
Score = 158 bits (174), Expect = 3e-33
Identities = 159/204 (78%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||||| ||||| || |||||||||||||||| |||| || | |||||||| || ||
Sbjct 1955462 TGAAGAGTAGACTCCTTCTGAATATTGTAATCGGACAAG-GTGCGACCATCTTCCAGTTG 1955404
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1955403 CTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTT 1955344
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| |||||||||||||| || || ||||| || || || | ||||| || ||
Sbjct 1955343 AGCCTTCACGTTCTCAATGGTATCGGATGGCTCCACCTCCAGAGTGATGGTCTTGCCAGT 1955284
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 1955283 CAGGGTCTTCACGAAGATTTGCAT 1955260
>seq2
Length=4222574
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| | ||||||||| || ||||| ||||| |||| ||||| | ||||| || |||||
Sbjct 180272 GTGCAAAGTGGACTCCTTCTGAATGTTGTAGTCGGATAGAGTGCGTCCATCCTCCAGCTG 180213
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| || || || || ||||| || || ||||||||||| || || ||
Sbjct 180212 CTTGCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATCCCTTCTTTGTCCTGGATCTT 180153
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| ||||| |||||||| || || || || | ||||| ||||| || ||
Sbjct 180152 GGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTAATGGTCTTGCCGGT 180093
Query 195117 CAAAGTTTTTACGAACACTTGCATTT 195142
| |||||| ||||| | ||||||||
Sbjct 180092 GAGAGTTTTMACGAAGATTTGCATTT 180067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109367124728651
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |