Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq2 159 2e-34
>seq2
Length=4222574
Score = 159 bits (176), Expect = 2e-34
Identities = 319/473 (67%), Gaps = 0/473 (0%)
Strand=Plus/Minus
Query 25887 TATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTG 25946
||| |||||| | || |||||| |||| ||||| | |||||| | ||| |
Sbjct 4214831 TATGTGGACACATTAGTGACCAATCTTCATTGGCTTCAACACGTTTCATAAAAAGATCAG 4214772
Query 25947 GAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTT 26006
||||||||| |||| |||| | ||| | ||| | ||| || ||||| ||| ||||
Sbjct 4214771 GAATCCACAATGCAAAAAACAGATCGCGCGCCCGATGTTCCTCCTTTCCAGTATTTTTTT 4214712
Query 26007 TTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066
| || || || || || || | |||||||||||| || ||||| || |||||||| |
Sbjct 4214711 TAAGGTCCAAAAATTCGAAGACATCTGAGTGCCAAGGCTCTAAGTAAATAGCAAATGCTC 4214652
Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126
| |||||| || || || ||||| || || | ||| | ||| |||||| | ||||
Sbjct 4214651 CAGGTCTTTTACCACCGCCCTGATCGACATAACGTGCCACATTATTAAAAACTCTTAACA 4214592
Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
|||| ||||||||| ||||| ||||| || | | ||| | |||| | | || ||
Sbjct 4214591 TTGGTACTAATCCATTTGAAGTACCGTTCGTTCCACAAATTGATGTTCCTTTAGCTCGAA 4214532
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAA 26246
|| |||| ||| | || || ||||| ||| | |||||||| ||| || | ||
Sbjct 4214531 TACAGTGAACATTCAGTCCAATGCCACCTGCCGACTTTGAAATCATTGCGCATTGCTCAA 4214472
Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306
||| | ||||| |||| || |||| || ||| | ||| || ||||| |
Sbjct 4214471 CTGATTTAAAAATCCCTTCAATTGAATCAGACACTATAGTTAAGAGAAAGCATGAAGACA 4214412
Query 26307 ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAA 26359
|||| | | | |||| ||| | ||| | || |||| ||||||||| ||
Sbjct 4214411 ATTGTGGACGGTTTGTGGCTGCAGCAAAAAGAGTTGGTGATGCATGAGTAAAA 4214359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253015165151975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |