Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09] 8,053 sequences; 115,885,644 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3 100 6e-16 >seq3 Length=21835025 Score = 100 bits (110), Expect = 6e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || | ||| | || | ||| || |||||| || ||| Sbjct 1955087 ATACCACCACGCAGACGGAGGACCAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCA 1955028 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| |||| ||| || || || ||||| | | ||| ||||| || Sbjct 1955027 GACAAAGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 1954968 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| || || || || || || | ||| || | || Sbjct 1954967 GGAATGCCTTCCTTATCTTGAATCTTGGCCTTGACGTTCTCAATGGTATCGGAAGGCTCA 1954908 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || || ||||| || || || || ||||||| || ||||||||||| Sbjct 1954907 ACCTCCAGGGTGATGGTCTTTCCCGTCAAAGTTTTAACGAAGATCTGCATTTT 1954855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984378422276550