Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq6 91.5 4e-13
>seq6
Length=21059900
Score = 91.5 bits (100), Expect = 4e-13
Identities = 170/246 (69%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| |||||| | ||||||||| || || |||||| || ||| || ||||| |||
Sbjct 2978495 TCCATAGCCTTGATGAGACGACGCTGGATGTAGCCAGTTTCAGCTGTCTTCACAGCCGTA 2978436
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCC 302692
||||| | ||| | | || ||||| || |||||| | | ||| |||| || ||||
Sbjct 2978435 TCAATCAAACCTTCTCTGCCGCCCATGGCGTGGAAGTAGAACTCGGACGGT-GTCAAGCC 2978377
Query 302693 CCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAA 302752
||| | | || |||| || || || | | ||| || || ||| |||| | |
Sbjct 2978376 GGCCAGGTACG-AGTTCTCCACAAAGCCCCTGGACTCTGGACCATAATCGTCCTTGATGA 2978318
Query 302753 AGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCT 302812
| || ||||| || | || |||| || || || ||||| || || ||||||||||
Sbjct 2978317 AATGCGGCAGAGTGCGCTTGCGGAAGCCATACGGTATGCGCTTGCCCTCCACGTTCTGCT 2978258
Query 302813 GTCCCA 302818
| ||||
Sbjct 2978257 GGCCCA 2978252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471665739239861
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |