Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09] 8,053 sequences; 115,885,644 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 4e-13 >seq6 Length=21059900 Score = 91.5 bits (100), Expect = 4e-13 Identities = 170/246 (69%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| | ||||||||| || || |||||| || ||| || ||||| ||| Sbjct 2978495 TCCATAGCCTTGATGAGACGACGCTGGATGTAGCCAGTTTCAGCTGTCTTCACAGCCGTA 2978436 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCC 302692 ||||| | ||| | | || ||||| || |||||| | | ||| |||| || |||| Sbjct 2978435 TCAATCAAACCTTCTCTGCCGCCCATGGCGTGGAAGTAGAACTCGGACGGT-GTCAAGCC 2978377 Query 302693 CCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAA 302752 ||| | | || |||| || || || | | ||| || || ||| |||| | | Sbjct 2978376 GGCCAGGTACG-AGTTCTCCACAAAGCCCCTGGACTCTGGACCATAATCGTCCTTGATGA 2978318 Query 302753 AGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCT 302812 | || ||||| || | || |||| || || || ||||| || || |||||||||| Sbjct 2978317 AATGCGGCAGAGTGCGCTTGCGGAAGCCATACGGTATGCGCTTGCCCTCCACGTTCTGCT 2978258 Query 302813 GTCCCA 302818 | |||| Sbjct 2978257 GGCCCA 2978252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471665739239861