Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq6 150 1e-31
seq2 91.5 1e-13
>seq6
Length=21059900
Score = 150 bits (166), Expect = 1e-31
Identities = 160/211 (76%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496
||||| |||||||| ||||||||||| || || |||||||| ||||| || | || ||
Sbjct 7520058 ATCGAATTGCGTTTGGGCGCCCAGCTCACAGCCAAAGTACTTGGTCGGATAGGTAGCTGG 7520117
Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556
| || | ||| | || | |||| ||||||||||| ||| || || |||||||||||
Sbjct 7520118 TCTCCCGATCGCTCTTGCCACCTCGGCCATGTTGACGAGGACCGTTTTAATGCCGTTGCC 7520177
Query 34557 CTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCAC 34616
||| ||||| || ||||| || ||| |||||||||||||| ||||| |||| ||
Sbjct 7520178 CTTACCTTCCACTTTGGCCTGGAGGCGTGGCATTTTGTAGCGATAGAAGATATCCGTAAC 7520237
Query 34617 ATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647
| |||| || || || || ||| ||||| ||
Sbjct 7520238 ACTGCGATTCACATTGACGGTCGCCATCTTG 7520268
>seq2
Length=4222574
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
||||||||||| || || |||||| | |||||||| ||||||||| | || |||||
Sbjct 180066 AAAATGCAAATCTTCGTKAAAACTCTCACCGGCAAGACCATTACCTTGGAGGTCGAGCCC 180125
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|| || ||| | || || ||||| ||||||||||| | || |||
Sbjct 180126 TCTGACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAAGAAGGGATCCCACCAGAT 180185
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || | || || | ||| || || ||||||||||||| | || | | || |||
Sbjct 180186 CAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGACGCACTCTATCCGACTAC 180245
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| || || || || |||||| | ||| | | ||||| || ||
Sbjct 180246 AACATTCAGAAGGAGTCCACTTTGCACTTAGTGCTCCGTCTGCGTGGTGG 180295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412801081274129
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |