Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09] 8,053 sequences; 115,885,644 total letters Query= NC_022613.1 Length=43686 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 2e-12 >seq2 Length=4222574 Score = 86.0 bits (94), Expect = 2e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 908 GCTGCCGGCTATGATCTGTTCAGTGCCTACGATATTACTGTTCCGGCACATGGTAGAGCG 967 ||||||||||||||| | ||| || || ||| || || || || | ||| | ||| Sbjct 535273 GCTGCCGGCTATGATTTACGCAGCGCTTATGATGTTGTGGTGCCAGCGCGTGGCAAAGCT 535214 Query 968 GTGGTGCCTACCGATTTGATGTTACACTTTCCGGAGGGTTGTTACGGTCGCATCGCGCCG 1027 |||||| || ||| || | | || | ||||| || | || |||||||| || ||| Sbjct 535213 GTGGTGAAAACGGATCTGCAGGTGCAGGTGCCGGAAGGCTCCTATGGTCGCATAGCACCG 535154 Query 1028 CGCTCGGGATTAGCGACTAAGTTCTTTATCGATGTTGGCGCAGGAGTTATAGATCCGGAT 1087 ||||| || | || ||| ||||||||||| ||||| || ||| | || |||| Sbjct 535153 CGCTCCGGGCTGGCCGTAAAGAATTTTATCGATGTGGGCGCCGGCGTTGTGGACGAGGAT 535094 Query 1088 TACCGGGGAAACGTTAGCGTTGTACTGTTTAA 1119 || || ||||| | | ||||| || || || Sbjct 535093 TATCGCGGAAATTTAGGTGTTGTCCTCTTCAA 535062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139660243100928