Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09]
8,053 sequences; 115,885,644 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2 87.8 2e-12
seq4 82.4 9e-11
>seq2
Length=4222574
Score = 87.8 bits (96), Expect = 2e-12
Identities = 185/270 (69%), Gaps = 6/270 (2%)
Strand=Plus/Plus
Query 179037 TGTGAAGATGTACCT--CGTTTGAGACGCATCTTTGCCACCCATGAGACGCGTCCCAAAT 179094
|||||||||||| | || ||| || |||||| ||||| | | ||| || || ||
Sbjct 3935356 TGTGAAGATGTAACGAGCGCTTGC-ACA-ATCTTTACCACCGGTTAAACGTGTGCCGAAC 3935413
Query 179095 TGACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTG 179154
||||| | || || || | ||| |||||||| || || | | | | ||||| ||
Sbjct 3935414 TGACCGCGAGGTTCTAGCAAATTTATATTGTTCGATCCGACAAAATTCTGTGCCAAATTT 3935473
Query 179155 ACAATCGT-ATCCGCGAGGGAGACTTCACCGTGATGGTAAGCCGACTTGTCCGCCACATA 179213
|| || || ||| || ||||| | || ||||||||||| || ||| | |||||||| |
Sbjct 3935474 ACTATAGTCATCTGC-AGGGACATCTCGCCGTGATGGTATGCTGACATTTCCGCCACCGA 3935532
Query 179214 TGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACAT 179273
| | | ||| ||||| || | ||| |||| ||| | |||||| | | ||||
Sbjct 3935533 GCCGGATAGCTGAGCCACTTTTACCTCCCTCTTGTCGTTACGCTTGAAGCAAGTAAACAT 3935592
Query 179274 CACCTTTCTTTGTGAAGGCTTGAGGCCGTC 179303
|||||| | || |||||| ||||| ||
Sbjct 3935593 CACCTTACGCTGACCAGGCTTTAGGCCATC 3935622
>seq4
Length=22154029
Score = 82.4 bits (90), Expect = 9e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093
|||||||| || ||||| | ||||| ||||| |||||||||||| ||||| ||||||
Sbjct 3240636 CCCTCGTCGCGTGAGATCAACTCATTGGAGAACGTCAGACCTGGCATCAGACCACGCTTC 3240695
Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
|||| ||| || |||| ||| || ||||||||| ||||||||
Sbjct 3240696 TTCAGCCAAAAGATCGAGGCAAAGCTTCCGCTGAAGAAGATTCCCTCCAC 3240745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618372946766680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |