Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09] 8,053 sequences; 115,885,644 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3 129 1e-24 >seq3 Length=21835025 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || ||||| || ||||| ||||| || | ||||| | ||||| Sbjct 1955070 GAGGACCAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGACAAAGTGCGACCATC 1955011 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || ||||||||||| || | |||||| || | | || |||||||| || Sbjct 1955010 TTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTATC 1954951 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || ||||| |||| | | | || ||| ||| || || || || || || Sbjct 1954950 TTGAATCTTGGCCTTGACGTTCTCAATGGTATCGGAAGGCTCAACCTCCAGGGTGATGGT 1954891 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| | ||| || ||||||| ||||||||| Sbjct 1954890 CTTTCCCGTCAAAGTTTTAACGAAGATCTGCATTTT 1954855 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||||||||||||||| || || || |||||||||| || || | |||||| Sbjct 1955471 AGAACCAAATGAAGAGTAGACTCCTTCTGAATATTGTAATCGGACAAGGTGCGACCATCT 1955412 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| || | | || |||||||| || Sbjct 1955411 TCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 1955352 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || |||| | | | || || ||| || || ||||| || || Sbjct 1955351 TGAATCTTAGCCTTCACGTTCTCAATGGTATCGGATGGCTCCACCTCCAGAGTGATGGTC 1955292 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||||||||||| ||||| Sbjct 1955291 TTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 1955260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153701749851563