Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq162 136 5e-27
>seq162
Length=246154
Score = 136 bits (150), Expect = 5e-27
Identities = 444/683 (65%), Gaps = 34/683 (5%)
Strand=Plus/Minus
Query 145606 AAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTC 145665
|| || || |||| ||| ||| | | ||| | ||| | ||||| || || || |
Sbjct 68266 AATTCTTCAATGTTCTCGACCTTTCGCTTGATTTTCAGCTTTGGAAACGGTCGTGGCTTG 68207
Query 145666 CTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAG 145724
| | || ||||| ||| || || || || ||||| || || || || | ||| ||||
Sbjct 68206 C-GTTCTAGCTGCTCCTTTAGTGGATCAACATGGTTAAGATACACATGAGTGTCGCCCAT 68148
Query 145725 GACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAG 145784
| ||||| || || || | || | |||||| | || || | ||||| ||| |||||
Sbjct 68147 GGTGTGGACAAAATCGCCCGTCTTCAAGCCCGTTACATGTGCAATCATGTGGGTGAGCAG 68088
Query 145785 GGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAG 145844
|| ||| ||| |||||||||||||| ||||| |||||||| | ||||| |||||
Sbjct 68087 GGCATAGGAGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCGGCGCTCCGCTGATACAG 68028
Query 145845 CTGGCAGGAGAGCTCCCCGC------CCGCCACGTAGAACTG-GCACAGGAGGTGGCAGG 145897
||||||||||||||| || | | |||||||| || ||| ||| ||||||||
Sbjct 68027 CTGGCAGGAGAGCTCTCCTCGAGTTTGAGAGACGTAGAATTGTGCA-AGGCAGTGGCAGG 67969
Query 145898 GCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGC 145957
| || | ||||| || | |||| || |||||||||| | | || | | |
Sbjct 67968 GGGGTAATGCCATTTTTGGTATGTCCAGGGGATTCCAGGCGGACATAATGA---TGCGAC 67912
Query 145958 TCTCG---GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCC 146014
||| || || | |||| || || | | | | |||||| | |||| |
Sbjct 67911 GATCGGATGGATTATCCCTGATGGTCCTAATTACCTGGCGCAACTGGTCGATTCCCTTGC 67852
Query 146015 CCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGT 146074
| | ||| || | | || | ||| |||| || ||||| | |||||| || || |
Sbjct 67851 CGCTGTAGTCATCGTCGCAGGTGCCATACTCGGCACCAAAGTGTCGCCACTGAAAGCCAT 67792
Query 146075 AGACGGGCCCCAGGTCCC------CGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128
|||| || ||||| || | || | ||| |||| ||||| | | | || |
Sbjct 67791 AGACAGGACCCAGATCTCCCACGGCGCGGTCCGTGTGGCCCAG------CTTGTCTAGAA 67738
Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGC---GGAGAGCTCATTGG 146185
| || | || | |||| | ||||| || | ||| | |||| ||||| || |
Sbjct 67737 ACTCTCTGGTGCTGTTGCCATCCCAAATGTGCACGTTCTTCGCCTGCAAGAGC---TTCG 67681
Query 146186 AGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCC 146245
|| || || | ||||| |||||||| || | |||| ||| |||| ||||
Sbjct 67680 CATCTGTCTTTCCGGCCACAAACCATAGCAGCTCCTCCACGACCGCCCGAAAGAACACCC 67621
Query 146246 TCTTGGTGGTCAGCAGGGGGAAC 146268
|||||||||||||||||| |||
Sbjct 67620 GCTTGGTGGTCAGCAGGGGAAAC 67598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590062527517400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |