Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq252 123 5e-23
>seq252
Length=176535
Score = 123 bits (136), Expect = 5e-23
Identities = 186/262 (71%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 189449 CTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGA 189508
|| |||||| || | || |||| ||||| |||| || || ||||| | ||| | ||
Sbjct 29766 CTGTGGAACTCGGCCCAGCTGCAACTGGTGCGAGAGGGCAAGATGCACGGATTTCTGCGC 29825
Query 189509 ATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTT-GAGTTA 189567
||||| ||||| ||||||||||| || ||||| || || ||| | || | ||||
Sbjct 29826 ATGTACTGGGCCAAGAAGATACTCGAGTGGACGGCCACGCCGGAACAGGCGCTCGAGTAC 29885
Query 189568 TAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGG 189627
| | ||| | ||| |||||||| |||||||| ||||| ||||| || || ||
Sbjct 29886 TCGATTCTGCTC-AACGACAAGTACAGTCTAGACGGGCGCGATCCCAACGGCTATGTGGG 29944
Query 189628 TTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGG 189687
|| |||||||| ||| | || ||||||| | | ||||| || | ||||||||||
Sbjct 29945 CTGCATGTGGTCCATTGGGGGCATACACGACATGGGCTGGAAGGAGCGTGCGATATTTGG 30004
Query 189688 AAAGATAAGATATATGAATTAT 189709
|||||| | || ||||| |||
Sbjct 30005 AAAGATTCGCTACATGAACTAT 30026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923174470177400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |