Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq16 120 7e-22
>seq16
Length=1810876
Score = 120 bits (132), Expect = 7e-22
Identities = 259/383 (68%), Gaps = 16/383 (4%)
Strand=Plus/Plus
Query 254008 ATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCC 254067
|| |||| || ||||||| ||||| || ||||| ||| ||||||||||| ||||
Sbjct 182271 ATATGCTGCTCTACGGTCCACCCGGCACGGGCAAAACGAGCACCATCCTGGCAGCAGCCC 182330
Query 254068 GAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACG 254127
| | || ||||| | ||| | || ||| | |||||||||||||| || || |
Sbjct 182331 GCCAGATCTTTGGCGACATGTACAAG---GATCGCATACTCGAGCTGAACGCCTCCGATG 182387
Query 254128 AACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCG------- 254180
| || || | | || || ||| ||| ||||||| |||||| || | |||
Sbjct 182388 AGCGTGGCATCAATGTGGTGCGCACCAAAATCAAGAACTTCTCCCAGCTATCGGCCAGCC 182447
Query 254181 ATTTCGTCGTTCCAAC--CCGGCT-GT-CCGCCTTTCAAGCTCGTGATCCTGGACGAGGC 254236
|| | ||| || | ||| | || || || |||||| || | ||||||||||||||
Sbjct 182448 ATGTG--CGTCCCGATGGCCGCCCAGTGCCTCCATTCAAGATCATCATCCTGGACGAGGC 182505
Query 254237 GGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGT 254296
||| | |||||| | ||| ||||||||||| || || || ||||||| | | |
Sbjct 182506 CGACTCGATGACGCATGCCGCTCAGTCCGCCCTGCGACGGACCATGGAGAAGGAGAGCAG 182565
Query 254297 TGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTC 254356
|| || || ||||| | |||||||| ||| || ||||| | || | | ||
Sbjct 182566 CAGCACACGCTTCTGCCTTATTTGCAACTATGTGACGCGCATCATTGTGCCCATTACGTC 182625
Query 254357 TCGGTGCGCCAAGTTTCGATTCA 254379
|| ||| |||||||||| ||||
Sbjct 182626 GCGCTGCTCCAAGTTTCGCTTCA 182648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073739778982080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |