Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq328 569 3e-157
seq111 138 1e-27
>seq328
Length=165906
Score = 569 bits (630), Expect = 3e-157
Identities = 1266/1880 (67%), Gaps = 30/1880 (2%)
Strand=Plus/Minus
Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 64889
||||| | ||| ||||| || | | || || ||||| || |||| ||| ||||||||
Sbjct 107408 TTGTCGACTGTAAATTGTATTGCATTGGCAGCTGGTTTTGTGCGTAAATAATACATTCCG 107349
Query 64890 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 64949
|||||||| || |||| | ||||||| || || | ||| || | ||
Sbjct 107348 GTTTTTAGTCCAGCTTTCCAGGAGAAAAAATGTATGGATGTCAATTTTCCGTAGTTAGGC 107289
Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009
|| || | ||| | ||| | || ||||||||||| || || || || || || ||||||
Sbjct 107288 TCGGCCACATGAACATTAAACGACTGACTTTGATCAATAAATGCACCTCTATCAGCAGCC 107229
Query 65010 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 65068
|| || || | | || || ||||||||| | |||||||||| |||| || ||
Sbjct 107228 ATCTTAATTGTGGATTTAACTGAAATTTCCCACACTGTTTTATAAAGATCGCG-AACATT 107170
Query 65069 TTCTGGAAG-GTTTG--TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 65125
|| |||| |||| |||| |||||||| || | | || || || |||| || ||
Sbjct 107169 TTGGGGAATAGTTTCAATATTTTGAATGGAGCCCCTACTTGAAATTATTTTATTTTTCAT 107110
Query 65126 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 65185
||||||| |||||| | ||| |||||| | || | | ||| |||| || |||||
Sbjct 107109 ATCATCATCCCATAAGTCCAACTCTGTTAAATCCCTTAATAAATGATGATTGACCACTTG 107050
Query 65186 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 65245
|||||| ||||| ||||||| | || || |||||| | ||||| ||||| | || ||
Sbjct 107049 AAATTCACCAGATAATACTCGTCTCGTATATATATTAGTTGTATATGGTTCGAATGATTC 106990
Query 65246 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 65305
||||| |||| |||||| ||||| ||||| || |||||||| || || || || |||
Sbjct 106989 GTTATTACCCATAATTTGGGCAGTAGATGCTGTAGGCATAGGAGCTACTAACAACGAATT 106930
Query 65306 TCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG 65365
|||| |||| | || | || | ||||| || || ||||| ||| | | || ||
Sbjct 106929 CCTAATTCCGTGTTTTTTAATGTCTTCTTTCAGGTTTTGCCAATCCCATAAGTTCGTTGG 106870
Query 65366 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATG 65424
||||||||| || || || | | || |||| ||| |
Sbjct 106869 AGTTTTATCCCACATATCATATTGTAGAATGCCATTGCTTACAGGACT-TCCTTTATAGG 106811
Query 65425 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 65484
| ||||| || || | | || ||||||||||| || ||||| || || ||||||
Sbjct 106810 TTTCGTACGGACCAAATATTTGAGAAAGTTCACAACTAGCTTCTAAAGCCCCAAAATAAA 106751
Query 65485 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 65544
| ||||| || || | | |||| | ||||| || ||| | ||| || |
Sbjct 106750 TAGTTTCAAATATTTGTTGGTTTAAAAGACTAGCTTCTTCACTTTCATAGGGAAAACGCA 106691
Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604
||||| || ||||| || || ||||||||||| ||||| || || | ||| || ||
Sbjct 106690 TTAGAATTAAAGCGTCAGCGAAACCTTGAACACCTATACCAATTGGACGATGCCTTAAAT 106631
Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664
| || | | ||||||||| | || ||||| || || ||||| |||||||| ||||||
Sbjct 106630 TGGATTTCTTAGCTTCTGGCAAGGGGTAATAGTTGATGTCTATTATTTTATTAAGATTTT 106571
Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTA---TTA 65721
| ||| |||| ||||| || | ||| ||||||||| | ||| |||
Sbjct 106570 TAGCAACAGTTTTGGTTACATCTTTTAATTTTTTGAAATCAAATGTTTTTTCTGGTGTTA 106511
Query 65722 CAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 65781
|||||||||| | ||||| || || | ||| ||||| || | ||||| || | | |
Sbjct 106510 CAAACATGTTAAGTGCAATTGAAGCTAAATTGCAAACAGCGATCTCATCAGGTGCAGAGT 106451
Query 65782 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTAC 65841
| | | || || || || | |||||| || || || || || | |||||||||||| |
Sbjct 106450 ACTCAACAATTTCTGTACATAAATTACTGCATTTAATAGTGCCAACATTTTGTTGATTGC 106391
Query 65842 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 65901
||||| | ||||| | ||||||| |||| ||| |||| |||||||||||| || ||||
Sbjct 106390 TCTTTCTATTACAGGAATCCTTAAAAAGCATGTATGGGTTACCAGTTTCAACTTGCGATT 106331
Query 65902 CTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCT 65959
||||||| || ||| | ||||| |||| || | | | |||| | | || ||||
Sbjct 106330 CTATAATGGCAAACCATAACGACT-GAGCTTTCACTGTTCGATTAGCACGTCC---CTCT 106275
Query 65960 TTCGTATAGTGTATACAA--TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 66017
| | ||| | | | || | | || || | || |||||||||| | | |||||||
Sbjct 106274 TGCTCATATTTGACATAAAGTTGCTCAAATTTTTCGCCCCAAACATCTTGAAGTCCAGGA 106215
Query 66018 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCA-CTCGTTTCATAAAGAG 66076
|||| || ||||||||||||||||| | | | | | ||||| | |||||||| || ||
Sbjct 106214 CATTTATGTGGACACATCAACGACCAGTTTTCATT-TGCTTCAACCCGTTTCATGAAAAG 106156
Query 66077 ATCAGGAATCCAAAGAGCTATAAATAA-ATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 66135
||| |||||||| | ||| ||||| || ||| | | || | ||| || ||||| || |
Sbjct 106155 ATCGGGAATCCATAAAGC-ATAAAAAAGATCCCGTGCTCGGTTTTCTTCTTTTCCAGTGT 106097
Query 66136 TCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCA 66195
| |||| || || | || | | || ||| ||||||| || || || || || || |
Sbjct 106096 TTCTTTTGAGGTCTAAAAATTCAAAAACATCTGAATGCCAGGGCTCTAAATAAATAGCAA 106037
Query 66196 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 66255
| ||||| | ||| ||||||||||| | |||| || |||||| | ||||
Sbjct 106036 AGGCACCAGGTCTTTTTCCACCTCCCTGATCAACATATCGTGCCACATTATTAAATACTC 105977
Query 66256 TCAACATTGGAA-TAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTT 66314
| | |||||||| |||| ||||| || ||||| || || || | || | | || |
Sbjct 105976 TTAGCATTGGAACTAAT-CCATTTGAAGTACCGTTCGTTCCACATATGGAAGTGCCTTTG 105918
Query 66315 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 66374
||||||||| | || || || ||||| || || ||| || || | ||| |||
Sbjct 105917 GCACGAATACAATGAACATTAAGTCCAATTCCACCCGCTGATTTGGAAATCATTGCACAT 105858
Query 66375 CGTTTTAACGTATCATAGATGCCCTCTATACTATC---ATCCATCATGTTAAGTAGAAAA 66431
||| | | | | | || || || || ||| || ||| ||| || ||||||
Sbjct 105857 TGTTCAACTGATTTAAAAATACCTTCAATTGAATCCGAATTCAT--TGTCAA-AAGAAAA 105801
Query 66432 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 66491
|| || | ||| | ||| | || | ||| ||| | || || || || ||||||
Sbjct 105800 CATGAGGATAGTTGAGGGCGATTTGTAGCAGCAGCAAAAAGAGTTGGCGAGGCATGCGTA 105741
Query 66492 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 66551
|| || || |||||||| ||||| || |||| ||||| | ||||| | ||||
Sbjct 105740 AAATATCGCTCTGAAAGTAGGTTGTAAGTTTCAACAGCTGCACCAATATCGTCTCCATGA 105681
Query 66552 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 66611
|| || | ||||| ||||||| |||||| || || | || | || || ||||||
Sbjct 105680 ATACCAAGAGCGACGCGCATTAGCATGTGTTGTGGACGCTCTGCAATTTTCCCATTTATT 105621
Query 66612 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 66671
|| | || ||||| || | || ||||| ||||||||||| || || || ||
Sbjct 105620 TTAAGTAAATAGGAACGCTCGAGCGTCTTAAATCCAAAATAGTTATAACCGAAATCACGA 105561
Query 66672 TCGTAAATAATAACCGAGTT 66691
|| ||||||||| | |||||
Sbjct 105560 TCATAAATAATAGCAGAGTT 105541
>seq111
Length=362587
Score = 138 bits (152), Expect = 1e-27
Identities = 351/532 (66%), Gaps = 3/532 (1%)
Strand=Plus/Plus
Query 36161 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 36220
|| || |||||||| ||||| ||||| | | || | |||||||| || || || |||
Sbjct 244663 GCAAAGTCGCAGTGGAGACCTTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGACCG 244722
Query 36221 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 36280
||||| ||||||||||| || |||||||| || || ||||| || ||||| |||
Sbjct 244723 GGCATGAGGCCACGCTTCTTCAGCCAAAAGATCGAGGCAAAGCTGCCGCTGAAGAAGATT 244782
Query 36281 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CACTGTCATG--TATC 36337
||||| || || ||||||||||||| | ||| || | || | | || | ||||
Sbjct 244783 CCTTCCACGGCTGCAAAGGCAATAATACGCTCGGCAAAGTTGGCCGATTTCGAGGATATC 244842
Query 36338 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 36397
|| | ||||| || ||||| |||||| ||||| ||||| | |||||| ||
Sbjct 244843 CAGGACAGGGCCCAGTCTGCCTTGCGCTTTACAGCCGGCATGGTCTCAACAGCATTGAAC 244902
Query 36398 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 36457
| |||| || || || | || || ||||| | | || ||||| ||
Sbjct 244903 AAGTAGTCGCGCTCCTTCGGCTCCCGTATGTAGGTGTCAATGAGCACGCTGTACATCTCG 244962
Query 36458 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 36517
|| || | ||| || ||||| || || || |||||||| || | ||||| || |||||
Sbjct 244963 GAGTGCACGTTCTCCATGGCAATCTGGAAGCCGTAGAAGCAACGCGCCTCCGTGATCTGC 245022
Query 36518 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 36577
|| || || || || || | | ||| || || || || || || ||| || ||
Sbjct 245023 ACCTCCTGACTGAAGCGCTCGACCAGATTCTCGTTAACAATGCCATCGGAGGCAGCGAAG 245082
Query 36578 AACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTG 36637
|| |||| || || || || || ||||| || || ||| || |
Sbjct 245083 AAGGCCAGCACGTGGGAGATGAAGTAGCGCTCGTTGTCGGTCAGACGGGCCCAGTCTGTC 245142
Query 36638 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689
|| || |||| |||||| |||||||| ||||| || || || || ||||
Sbjct 245143 GCGTCCTTCGATAGATCCACCTCTTCCACAGTCCAGAAGGAGGCTTCGGCCT 245194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658156880445400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |