Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq162 168 6e-37
>seq162
Length=246154
Score = 168 bits (186), Expect = 6e-37
Identities = 492/745 (66%), Gaps = 26/745 (3%)
Strand=Plus/Minus
Query 20781 ACGGCCATCTCCATCTCTATGTGGGGATGGGGGTCGTAGCCCTCGAGACTCAGA-TCCGC 20839
|||||||| ||||||| ||| | || | || |||||||| || |||| | || |
Sbjct 68332 ACGGCCATGTCCATCTTTATCTTAGGGTAAGGATCGTAGCCGATGAC-CTCAAAGTCTTC 68274
Query 20840 GCGCGTAAAGTCCTCCAGACGCGCCACCTTTCTCAAAATCTTCAGCCGCGGAAACGGACG 20899
| ||| || || | | | ||||||| | || |||||| |||||||| ||
Sbjct 68273 GTATCGAAATTCTTCAATGTTCTCGACCTTTCGCTTGATTTTCAGCTTTGGAAACGGTCG 68214
Query 20900 CGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTC 20959
|| | | ||||| | || |||||||| ||||| || || || | |||
Sbjct 68213 TGGCTTGCGTTCTAGCTGCTCCTTTAGTGGATCAACATGGTTAAGATACACATGAGTGTC 68154
Query 20960 ACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGT 21019
|||| |||||| ||||| || |||| ||| |||||| || || || |||| | ||
Sbjct 68153 GCCCATGGTGTGGACAAAATCGCCCGTCTTCAAGCCCGTTACATGTGCAATCATGTGGGT 68094
Query 21020 CAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTG 21079
|| ||||| ||| ||||||||| || || || || ||||||||||||||| || |||
Sbjct 68093 GAGCAGGGCATAGGAGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCGGCGCTCCGCTG 68034
Query 21080 GTACAGCTGGCAGGACAGCTCCCCCC------GAGCCACGTAAAACTGACACAAAAC-GT 21132
|||||||||||||| ||||| || | ||| ||||| || || ||| | ||
Sbjct 68033 ATACAGCTGGCAGGAGAGCTCTCCTCGAGTTTGAGAGACGTAGAATTG-TGCAAGGCAGT 67975
Query 21133 GACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGC 21192
| || || || | ||||| | | |||| ||| ||||| ||| |||||| |||||
Sbjct 67974 GGCAGGGGGGTAATGCCATTTTTGGTATGTCCAGGGGATTCCAGGCGGACATAATGATGC 67915
Query 21193 GCCGATCG--TGGGGCCGCCTGTTAATTAGATCC--ACCACGTAACGCAGCTGGTCCACC 21248
| |||||| ||| || | || | ||| | || | |||| |||||| |
Sbjct 67914 GACGATCGGATGGATTATCC--CTGAT--GGTCCTAATTACCTGGCGCAACTGGTCGATT 67859
Query 21249 CCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGG 21308
|||| || ||||| ||||| | ||||| || ||||| |||| ||||||
Sbjct 67858 CCCTTGCCGCTGTAGTCATCGTCGCAGGTGCCATACTCGGCACCAAAGTGTCGCCACTGA 67799
Query 21309 AACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCCTGCGCCGCCAAA 21368
|| || || || || |||||||| ||| || ||||||| | |||| || | | |
Sbjct 67798 AAGCCATAGACAGGACCCAGATCTCCCACGGCGCGGTCCGTGTGGCCCAGCTTGTCTAGA 67739
Query 21369 AAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACG--CCGCGGC-GCGACAG-TTCGGT 21424
|| | | || | || | |||||||| | ||| | || | || | || ||||
Sbjct 67738 AACTCTCTGGTGCTGTTGCCATCCCAAATGTGCACGTTCTTCGCCTGCAAGAGCTTCGCA 67679
Query 21425 GGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCCTCCAAAACAC 21484
||| | ||| | |||||| |||| |||||||||||| ||| | |||||
Sbjct 67678 TCTGTCTTTCCGGCC----ACAAACCATAGCAGCTCCTCCACGACCGCCCGAAAGAACAC 67623
Query 21485 CCTTTTGGTGGTTAACAGAGGAAAC 21509
|| |||||||| | ||| ||||||
Sbjct 67622 CCGCTTGGTGGTCAGCAGGGGAAAC 67598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427765911838800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |