Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq234 125 5e-24 >seq234 Length=227530 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| | |||||| || || || ||||| ||||| ||| ||| | ||||| Sbjct 9927 ACCAAATGCAAGGTGGACTCCTTCTGAATGTTATAATCAGATAGTGTTCGGCCATCTTCC 9986 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 ||||||||||||||| | ||||| |||||||| || ||||||||||||||||| | Sbjct 9987 AATTGTTTGCCAGCGAAGATCAAGCGTTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGA 10046 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| || ||| |||| |||||||| ||| || || | || ||||| || Sbjct 10047 ATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTTATGGTCTTG 10106 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || |||||||| || ||||| Sbjct 10107 CCCGTAAGGGTCTTTACAAAGATCTGCAT 10135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362170658795835