Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_005260.1
Length=233234
Score E
Sequences producing significant alignments: (Bits) Value
seq22 86.0 9e-12
seq8 86.0 9e-12
seq15 84.2 3e-11
>seq22
Length=1073832
Score = 86.0 bits (94), Expect = 9e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 108011 TGGAGCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCA 108070
||| ||||||| || | |||||| || ||||||| ||||||||||| ||||||||||||
Sbjct 996516 TGGTGCCCCCATTCAGATTTGAACTGAAGACCTACCGCTTACAAGGCGGTTGCTCTACCA 996575
Query 108071 CTGAGCTATA 108080
||||||||||
Sbjct 996576 CTGAGCTATA 996585
>seq8
Length=1553183
Score = 86.0 bits (94), Expect = 9e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 108011 TGGAGCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCA 108070
||| ||||||| || | |||||| || ||||||| ||||||||||| ||||||||||||
Sbjct 956215 TGGTGCCCCCATTCAGATTTGAACTGAAGACCTACCGCTTACAAGGCGGTTGCTCTACCA 956156
Query 108071 CTGAGCTATA 108080
||||||||||
Sbjct 956155 CTGAGCTATA 956146
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 108310 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 108369
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 408617 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 408558
Query 108370 GAACGG 108375
||||||
Sbjct 408557 GAACGG 408552
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 108310 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 108369
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 562067 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 562126
Query 108370 GAACGG 108375
||||||
Sbjct 562127 GAACGG 562132
>seq15
Length=1383265
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 108310 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 108369
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 1070650 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 1070591
Query 108370 GAACGG 108375
||||||
Sbjct 1070590 GAACGG 1070585
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 108310 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 108369
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 1183205 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 1183264
Query 108370 GAACGG 108375
||||||
Sbjct 1183265 GAACGG 1183270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 746202750784400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |