Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq33 131 1e-25 >seq33 Length=838361 Score = 131 bits (144), Expect = 1e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||||| || | ||| || || || || || ||| |||||||| || | | Sbjct 265288 GCGCTCGCAAATAAACTGAGCAATGCGATCTCCATGCTTCACCTCGAAGTCCGTTTCAGA 265347 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||| || || ||||||| |||||||||||||| | || | ||||| ||||| Sbjct 265348 GTGGTTGAATAGAACGACGCCCAGATTGCCGCGGTAGTCTTCATCCACAACGCCGGCGCC 265407 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCC 5760 ||| || || |||| ||| || |||||||| ||||| ||||| ||||| || ||| | || Sbjct 265408 CACATCAATAAAGTTCTTCACGGCCAGGCCAGAGCGCGGAGCGACGCGACCATAGGAGCC 265467 Query 5761 ATCGGGAAGCTGTATCTGCAGGTCCGT 5787 || |||| || | ||||||||| || Sbjct 265468 CTCCGGAACTTGCACCTGCAGGTCGGT 265494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430044258107720