Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq162 104 2e-17
>seq162
Length=246154
Score = 104 bits (114), Expect = 2e-17
Identities = 180/258 (70%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 25346 AAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTC 25405
||| || || | | |||| ||| | | || || |||| | ||||| |||| ||||
Sbjct 68267 AAATTCTTCAATGTTCTCGACCTTTCGCTTGATTTTCAGCTTTGGAAACGGTCGTGGCTT 68208
Query 25406 CCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAG 25465
| || ||||| ||| || || || || || | || || || |||| ||| ||||
Sbjct 68207 GCGTTCTAGCTGCTCCTTTAGTGGATCAACATGGTTAAGATACACATGAGTGTCGCCCAT 68148
Query 25466 AGTGTGGACAAACTCTCCCG-GTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGA 25524
||||||||||| || |||| ||| ||||| || || | || ||||||| ||||| |
Sbjct 68147 GGTGTGGACAAAATCGCCCGTCTTCAAGCCC-GTTACATGTGCAATCATGTGGGTGAGCA 68089
Query 25525 GAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAG 25584
| ||| ||||||||| ||||| || || | |||||||| | | || ||| ||
Sbjct 68088 GGGCATAGGAGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCGGCGC-TCCGCTGATAC 68030
Query 25585 AGCTGACACGAGAGCTCT 25602
||||| || |||||||||
Sbjct 68029 AGCTGGCAGGAGAGCTCT 68012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340129578598755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |