Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq310 84.2 9e-12 >seq310 Length=133963 Score = 84.2 bits (92), Expect = 9e-12 Identities = 116/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 11200 CACTACCTCGGTGCTGTAGTGGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAG 11259 ||| || |||||| |||||| ||||| ||||||||| |||||||| || ||||| | || Sbjct 124184 CACAACTTCGGTGGTGTAGTTGTCCTTGCCGTCCTGCCCCTGCCATTTCCGGGTCTGGAG 124243 Query 11260 GCTGCCTTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAG 11319 |||||||| ||||||| | ||| ||||| | | | | | || | |||||||| Sbjct 124244 TGAGCCTTCGAGATAGACCTTGCGGCCTTTTCGAATGAACCGTTCAGCCACATCGGCCAG 124303 Query 11320 CCGGCC---AAAGAGCACGACCCGGTGCCACTCGGTGCGCTC 11358 ||| | ||| | || | || ||||| || ||||| || Sbjct 124304 CCGTTCATTAAAAATAACTATGCGATGCCATTCTGTGCGTTC 124345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208494283002460