Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_006552.1
Length=65195
Score E
Sequences producing significant alignments: (Bits) Value
seq310 84.2 9e-12
>seq310
Length=133963
Score = 84.2 bits (92), Expect = 9e-12
Identities = 116/162 (72%), Gaps = 3/162 (2%)
Strand=Plus/Plus
Query 11200 CACTACCTCGGTGCTGTAGTGGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAG 11259
||| || |||||| |||||| ||||| ||||||||| |||||||| || ||||| | ||
Sbjct 124184 CACAACTTCGGTGGTGTAGTTGTCCTTGCCGTCCTGCCCCTGCCATTTCCGGGTCTGGAG 124243
Query 11260 GCTGCCTTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAG 11319
|||||||| ||||||| | ||| ||||| | | | | | || | ||||||||
Sbjct 124244 TGAGCCTTCGAGATAGACCTTGCGGCCTTTTCGAATGAACCGTTCAGCCACATCGGCCAG 124303
Query 11320 CCGGCC---AAAGAGCACGACCCGGTGCCACTCGGTGCGCTC 11358
||| | ||| | || | || ||||| || ||||| ||
Sbjct 124304 CCGTTCATTAAAAATAACTATGCGATGCCATTCTGTGCGTTC 124345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 208494283002460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |