Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-26 seq15 120 3e-22 >seq8 Length=1553183 Score = 134 bits (148), Expect = 2e-26 Identities = 199/279 (71%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 6467 AGAGCTTCACCGAAGCAAATAGCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGA 6526 || |||||||| || || || || | ||||| |||||||| | ||||||||||||| Sbjct 15105 AGGGCTTCACCAAACGCAACCGCTTTACCAGCGATTACATGCATCAGCGGACCACCCTGA 15164 Query 6527 ATACCCGGGAAGATAGCAGAATTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATG 6586 | ||| ||||| | |||||||| | |||||||| | | |||| || || |||||| Sbjct 15165 AGACCGGGGAACACCGCAGAATTGATCTTCTTGGCCAGTGCTTCATCATTGGTCAGAATG 15224 Query 6587 AGACCACCACGAGGGCCGCGCAAAGTTTTATGAGTTGTAGAAGTAACAACGTCAGCACCC 6646 | |||||||| ||||| |||| || ||||| || || || || |||||||||||| Sbjct 15225 ACGCCACCACGTGGGCCACGCAGTGTCTTATGCGTGGTGGATGTCACAACGTCAGCA--- 15281 Query 6647 CATTTGAGTGGATTAGCATGAAGTTTTGATGCGACGAATCCAGCAAAGTGGGCCATATCG 6706 ||| | || || | | || | || || | || ||||| || |||||||| Sbjct 15282 TATTCAACCGGGTTGGGGTACAGACCAGCCGCAACCAGACCGGCAAAATGCGCCATATCA 15341 Query 6707 ACCATCAACTTCGCGCCAGACAT-ATCAGCAATGCTGCG 6744 |||||||| ||||||| || | ||| ||||| | ||| Sbjct 15342 ACCATCAAGGCCGCGCCA-ACTTCATCCGCAATCCGGCG 15379 >seq15 Length=1383265 Score = 120 bits (132), Expect = 3e-22 Identities = 196/279 (70%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 6467 AGAGCTTCACCGAAGCAAATAGCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGA 6526 || |||||||| || || ||||| | ||||| |||||||| | ||||||||||||| Sbjct 729624 AGGGCTTCACCAAACGCAACCGCCTTACCAGCGATTACATGCATCAGCGGACCACCCTGA 729683 Query 6527 ATACCCGGGAAGATAGCAGAATTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATG 6586 | ||| ||||| | |||||||| | |||||||| | | | || || || ||||| Sbjct 729684 AGACCGGGGAACACCGCAGAATTGATCTTCTTGGCCAGTGCTTCGTCATTGGTCAGAATA 729743 Query 6587 AGACCACCACGAGGGCCGCGCAAAGTTTTATGAGTTGTAGAAGTAACAACGTCAGCACCC 6646 | |||||||| ||||| |||| || ||||| || || || || || ||||||||| Sbjct 729744 ACGCCACCACGTGGGCCACGCAGTGTCTTATGCGTGGTGGATGTCACTACGTCAGCA--- 729800 Query 6647 CATTTGAGTGGATTAGCATGAAGTTTTGATGCGACGAATCCAGCAAAGTGGGCCATATCG 6706 ||| | || || | | || | || || | || ||||| || |||||||| Sbjct 729801 TATTCAACCGGGTTGGGGTACAGACCAGCCGCAACCAGACCGGCAAAATGCGCCATATCA 729860 Query 6707 ACCATCAACTTCGCGCCAGACAT-ATCAGCAATGCTGCG 6744 ||||||| |||||| ||| | ||| ||||| | ||| Sbjct 729861 ACCATCAGGGCCGCGCC-GACTTCATCCGCAATCCGGCG 729898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553340215759800