Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_007022.1
Length=172963
Score E
Sequences producing significant alignments: (Bits) Value
seq8 134 2e-26
seq15 120 3e-22
>seq8
Length=1553183
Score = 134 bits (148), Expect = 2e-26
Identities = 199/279 (71%), Gaps = 5/279 (2%)
Strand=Plus/Plus
Query 6467 AGAGCTTCACCGAAGCAAATAGCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGA 6526
|| |||||||| || || || || | ||||| |||||||| | |||||||||||||
Sbjct 15105 AGGGCTTCACCAAACGCAACCGCTTTACCAGCGATTACATGCATCAGCGGACCACCCTGA 15164
Query 6527 ATACCCGGGAAGATAGCAGAATTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATG 6586
| ||| ||||| | |||||||| | |||||||| | | |||| || || ||||||
Sbjct 15165 AGACCGGGGAACACCGCAGAATTGATCTTCTTGGCCAGTGCTTCATCATTGGTCAGAATG 15224
Query 6587 AGACCACCACGAGGGCCGCGCAAAGTTTTATGAGTTGTAGAAGTAACAACGTCAGCACCC 6646
| |||||||| ||||| |||| || ||||| || || || || ||||||||||||
Sbjct 15225 ACGCCACCACGTGGGCCACGCAGTGTCTTATGCGTGGTGGATGTCACAACGTCAGCA--- 15281
Query 6647 CATTTGAGTGGATTAGCATGAAGTTTTGATGCGACGAATCCAGCAAAGTGGGCCATATCG 6706
||| | || || | | || | || || | || ||||| || ||||||||
Sbjct 15282 TATTCAACCGGGTTGGGGTACAGACCAGCCGCAACCAGACCGGCAAAATGCGCCATATCA 15341
Query 6707 ACCATCAACTTCGCGCCAGACAT-ATCAGCAATGCTGCG 6744
|||||||| ||||||| || | ||| ||||| | |||
Sbjct 15342 ACCATCAAGGCCGCGCCA-ACTTCATCCGCAATCCGGCG 15379
>seq15
Length=1383265
Score = 120 bits (132), Expect = 3e-22
Identities = 196/279 (70%), Gaps = 5/279 (2%)
Strand=Plus/Plus
Query 6467 AGAGCTTCACCGAAGCAAATAGCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGA 6526
|| |||||||| || || ||||| | ||||| |||||||| | |||||||||||||
Sbjct 729624 AGGGCTTCACCAAACGCAACCGCCTTACCAGCGATTACATGCATCAGCGGACCACCCTGA 729683
Query 6527 ATACCCGGGAAGATAGCAGAATTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATG 6586
| ||| ||||| | |||||||| | |||||||| | | | || || || |||||
Sbjct 729684 AGACCGGGGAACACCGCAGAATTGATCTTCTTGGCCAGTGCTTCGTCATTGGTCAGAATA 729743
Query 6587 AGACCACCACGAGGGCCGCGCAAAGTTTTATGAGTTGTAGAAGTAACAACGTCAGCACCC 6646
| |||||||| ||||| |||| || ||||| || || || || || |||||||||
Sbjct 729744 ACGCCACCACGTGGGCCACGCAGTGTCTTATGCGTGGTGGATGTCACTACGTCAGCA--- 729800
Query 6647 CATTTGAGTGGATTAGCATGAAGTTTTGATGCGACGAATCCAGCAAAGTGGGCCATATCG 6706
||| | || || | | || | || || | || ||||| || ||||||||
Sbjct 729801 TATTCAACCGGGTTGGGGTACAGACCAGCCGCAACCAGACCGGCAAAATGCGCCATATCA 729860
Query 6707 ACCATCAACTTCGCGCCAGACAT-ATCAGCAATGCTGCG 6744
||||||| |||||| ||| | ||| ||||| | |||
Sbjct 729861 ACCATCAGGGCCGCGCC-GACTTCATCCGCAATCCGGCG 729898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553340215759800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |