Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_007804.2
Length=39104
Score E
Sequences producing significant alignments: (Bits) Value
seq26 86.0 2e-12
seq39 84.2 5e-12
>seq26
Length=998041
Score = 86.0 bits (94), Expect = 2e-12
Identities = 123/171 (72%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 27929 CACGATATGCGCCGTACAGCCAGTACGTTGTTGCATGAGGCTGGTTATCCTTCAGACTGG 27988
|| ||| ||||| | || || || || || |||| ||||| |||||| | | || |||
Sbjct 160651 CATGATTTGCGCAGGACGGCAAGCACTCTGCTGCACGAGGCAGGTTATAATACTGATTGG 160710
Query 27989 ATTGAAAAGGCTCTGGCACATGAGCAGAAAGGTGTGCGCGCCGTATATAACAAAGCGGAA 28048
|| || ||| || || ||||||||||||||||| | || || ||||| || || |||
Sbjct 160711 ATCGAGAAGTGCCTTGCCCATGAGCAGAAAGGTGTAAGAGCTGTTTATAATAAGGCCGAA 160770
Query 28049 TA-CGCCAGACAGCGCGCCTACATGTTGCAGCAGTGGTCCGATATGATTGA 28098
|| || | |||||| || ||| | || | ||| | |||||||||||
Sbjct 160771 TATCGTGA-CCAGCGCACCGCTATGCTTCAAGACTGGGCTGATATGATTGA 160820
Score = 84.2 bits (92), Expect = 5e-12
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 2853 TGGCGTGGCATGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTCC 2912
||||| | | ||| ||||||||||| ||| || || ||||||||||| |||||||| |||
Sbjct 454424 TGGCGCGCCCTGCTGGATTCGAACCAGCGGCCCACAGCTTAGAAGGCTGTTGCTCTATCC 454365
Query 2913 AACTGAGCTAA 2923
|||||||||||
Sbjct 454364 AACTGAGCTAA 454354
>seq39
Length=736423
Score = 84.2 bits (92), Expect = 5e-12
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 2853 TGGCGTGGCATGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTCC 2912
||||| | | ||| ||||||||||| ||| || || ||||||||||| |||||||| |||
Sbjct 89891 TGGCGCGCCCTGCTGGATTCGAACCAGCGGCCCACAGCTTAGAAGGCTGTTGCTCTATCC 89832
Query 2913 AACTGAGCTAA 2923
|||||||||||
Sbjct 89831 AACTGAGCTAA 89821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125008327477020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |